Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq69 304 2e-77 seq60 96.9 4e-15 >seq69 Length=709337 Score = 304 bits (336), Expect = 2e-77 Identities = 840/1277 (66%), Gaps = 27/1277 (2%) Strand=Plus/Minus Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 || || |||||||| |||| ||| |||||||| ||||||| | |||||| || || Sbjct 434279 TTTAATGCTGGTACTCCAAAACCACAAATGTCATCTTGTTTCTTGGTTGCAATGAAAGAA 434220 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 ||||| || | || ||||| | |||| | | ||||| ||| |||||| | ||| Sbjct 434219 GATTCTATTGAAGGTATTTATGACACTTTAAAGACTTGTGCTTTAATTTCAAAGAGTGCT 434160 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTAC 111907 |||||||| || ||||||| ||| | | | ||| | || || |||| ||||| Sbjct 434159 GGTGGTATTGGTTTGCACATTCATAACATTCGTTCCA-CTGGTGCTTATATTGCTGGTAC 434101 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 ||| ||| || |||||||||| || ||| |||| || || ||| ||| || || || Sbjct 434100 AAACGGTACTTCTAATGGTATTATCCCTATGGTTCGTGTTTTCAACAACACTGCCCGTTA 434041 Query 111968 TGTAAACCAAGCTGGGCGTCGCAAGGGATC------TATCGCAGTCTATCTTGAGCCATG 112021 ||| | |||| ||| | |||| || | | | || | |||||||| ||||| Sbjct 434040 TGTTGATCAAGGTGG---TAACAAGAGACCAGGTGCTTTTGCTTTGTATCTTGAACCATG 433984 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||| |||||| | || ||| ||||| | | ||||| ||| | || || | Sbjct 433983 GCACAGTGATATCTTTGATTTCATTGAGATCAGAAAGAACCACGGTAAGGAAGAAAT-CA 433925 Query 112082 GTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | || | ||| | ||| | || | ||||| |||||| | || |||||||||||||| Sbjct 433924 GAGCTAGAGATTTATTCCCAGCCTTGTGGATCCCAGATTTGTTTATGAAGAGAGTTGAAC 433865 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 | | ||| | ||| | | || | |||| | | || || || | | || | | Sbjct 433864 AAAATGGTGAGTGGACATTGTTCTCTCCAAATGAAGCTCCAGGATTGGCTGACACTTATG 433805 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260 |||| ||||||| | | ||| ||| || || ||| |||| | | || Sbjct 433804 GTGACGAGTTTGTTGAGTTGTACGAAAAATATGAAAGGGAAGGTCGTGGTAGAAAAACCA 433745 Query 112261 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | ||| | ||||| | | || | | |||||||||| |||||||| |||| Sbjct 433744 TCAAGGCTCAAAAGTTGTGGTACTCCATCTTGGAAGCTCAAACCGAAACTGGTACCCCAT 433685 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||| | || || || || |||||| ||| || ||||||||||| ||| | |||| Sbjct 433684 TCATGTTGTATAAGGATGCTTGTAACACCAAGTCCAACCAAAAGAATTTAGGTATTATCA 433625 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 | ||||||| | ||| ||||| | |||| ||| ||| || ||||| | Sbjct 433624 AATCTTCCAACTTGTGTTGTGAAATTGTCGAATACTCAGCTCCAGACGAAGTTGCTGTCT 433565 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-- 112497 ||||| | ||||| || ||| | || || | | || | ||| | ||| || ||| Sbjct 433564 GTAACTTGGCATCGATTGCTTTACCTTCGTTTATTGAACAAGATGGTAAACACGCTTGGT 433505 Query 112498 ---ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554 | | ||| || | || || ||||| ||| ||| || ||| | |||||||| | Sbjct 433504 ACAACTTTGACAAGTTGCATGATGTTACCAAAGTTGTTACTCGTAACTTGAACAGAGTCA 433445 Query 112555 TTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTC 112611 | || || |||| |||||| || ||| ||| |||||||| ||||||||| | | Sbjct 433444 TAGACAGGAATTATTACCCAGTCCCTGA---AGCTGAGAAATCTAACATGAGACACAGAC 433388 Query 112612 CAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTG 112671 |||||| | || ||||||||| | || |||| ||||| ||| | || ||| | Sbjct 433387 CAATTGCATTGGGAGTCCAAGGTTTGGCTGATGCCTTCATGGTTTTAAGAATCGGATTCG 433328 Query 112672 ATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTC 112731 ||||| | ||||| | ||| | || | || || || || || |||||||| ||| Sbjct 433327 ATTCCCAAGAAGCTAGAGAATTAAACATTCAAATTTTCGAAACTATCTATCACGCTGCTG 433268 Query 112732 TTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 112791 |||| || | || |||||| | | || ||||| |||||||||| | || || | Sbjct 433267 TTGAAGCTTCTATTGAATTGGCACAAGAAGAAGGTCCTTATGAAACCTACCAAGGATCAC 433208 Query 112792 CAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTCACTAC 112850 |||| || ||||| || | |||| ||| ||||||| | || | | || | | | Sbjct 433207 CAGCATCCCAAGGTTTGTTACAATATGACTTGTGGGACAGAAAGCCTACAGAATTA-TGG 433149 Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 || ||||| | | || || | | | ||| | | ||| | | ||| || Sbjct 433148 GATTGGGATGAATTGAAACAAAAACTTGCCAAACATGGTATGAGAAACTCTTTGTTGGTG 433089 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || ||||||||||| || ||||| ||||||| |||||||| |||||||| |||||||| Sbjct 433088 GCTCCAATGCCAACCGCTTCCACATCACAAATTTTGGGTAACAATGAATGTTTTGAACCA 433029 Query 112971 TACACGACGAACATCTA 112987 ||||| |||||||||| Sbjct 433028 TACACTTCGAACATCTA 433012 >seq60 Length=402545 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 |||||| ||||| || ||||| || ||||| ||||| ||||| || || | ||||| Sbjct 120768 CTATGGACGTGTAGCTCCACGTTCAGGTCTTGCTGTCAAACATGGAATTTCAACCGGTGC 120709 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGA 163665 || || |||||| | || ||| ||||||||| ||||| || | || |||||| ||| Sbjct 120708 TGGGGTAATTGATGCTGATTACCGGGGTGAAGTTAAAGTTGTCTTGTTTAATCATTCAGA 120649 Query 163666 CAAAGACTTTGAGGTAAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTGAGAGGTGTGA 163725 ||| | ||||| | || | ||| || | || || ||| | ||| | || || || Sbjct 120648 TAAACATTTTGAAATTAAAAAGGGAGATAGAATTGCTCAATTAGTTTTGGAAAGAATTGT 120589 Query 163726 GACACCCGATGTGGAGGAAATTG 163748 | | ||| |||||||||||| Sbjct 120588 AAATGCTGATTTGGAGGAAATTG 120566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741313700800