Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq68 105 8e-18
>seq68
Length=663299
Score = 105 bits (116), Expect = 8e-18
Identities = 335/503 (67%), Gaps = 25/503 (5%)
Strand=Plus/Minus
Query 159273 TGATATCACAGGGTTTGATTCTA-TATCATTACAA-CCTAACGCAGGATCACAGGGTGAG 159330
||||||||| || |||||| ||| || | | || || ||| | || | || |||||
Sbjct 91726 TGATATCACCGGTTTTGATGCTACTACC--TCCATGCCAAACTCTGGTGCTCAAGGTGAA 91669
Query 159331 TATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGA-TA-----AA 159384
||| | ||| ||| | || | ||| || ||| |||| ||| ||| || ||
Sbjct 91668 TATACTGGATTGTCATTGATTAGACAATATCA-CAA--ATCAAGAGGTGAATACGAACAA 91612
Query 159385 AGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATG 159444
||||| | || | || || | || || ||||| ||||||||||| ||||||| |||
Sbjct 91611 AGAAACATTTGCCTTATTCCTGTTTCTGCTCATGGTACTAATCCTGCCTCAGCAGCAATG 91552
Query 159445 GCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGAT 159504
|| | |||||||| ||||| ||| || |||| ||| ||| | || |||
Sbjct 91551 TGTGGATTAAAAGTTGTTCCAGTCAAATGTTTAGACAATGGTTCCATTGACTTGAATGAT 91492
Query 159505 CTAGAGAAGAAAGCAATCATGAATACATTTGAAC----TGTCATGTATTATGATTACATA 159560
| || ||| || || || || ||||| | ||| | || ||||| || ||
Sbjct 91491 TT-GA-AAGCAA--AAGCAGAAAAACATTCCGCCAATTTGTGTTCCATCATGATCACTTA 91436
Query 159561 TCCATCTACACATGGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATG 159619
||| || || |||| | |||||| || ||| | | | ||| | | |||||||||
Sbjct 91435 TCCTTCAACTTATGGATTGTTTGAACCAGGTGTCAAAGAAGCTAT-TGATATTGTTCATC 91377
Query 159620 AGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAA 159679
| || || || |||||| | |||||||| ||| | |||||||| || ||| || ||
Sbjct 91376 AAAACGGCGGGTTGGTATACTTGGATGGTGCTAATATGAATGCACAAGTTGGTTTAACAT 91317
Query 159680 AACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATT- 159738
|| |||| | ||||| |||||||||||| | || | || || ||||| || |||
Sbjct 91316 CTCCTGGTGATTTGGGTGCTGATGTATGTCATTTGAATATTCACAAAACATT-TGCATTG 91258
Query 159739 CCACATGGAGGTGGAGGTCCTGG 159761
||||| ||||| || || ||
Sbjct 91257 AGTCATGGTGGTGGTGGACCCGG 91235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588050170910400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |