Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq41 168 1e-36 seq54 138 3e-27 >seq41 Length=287713 Score = 168 bits (186), Expect = 1e-36 Identities = 171/223 (77%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||| | ||| || |||||||| || ||||| || | ||||| Sbjct 13260 TCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGAGT 13201 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | || ||||| || ||||| | || |||||||||||| ||||| || Sbjct 13200 TCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACC 13141 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| || || || |||||| || ||||| ||||| ||| ||| ||||| | Sbjct 13140 TTCTTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAA 13081 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| | ||||| || || |||||||| ||||| | ||||||| Sbjct 13080 GGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATT 13038 >seq54 Length=356724 Score = 138 bits (152), Expect = 3e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||| | |||||| || |||||||| ||||| |||| | || Sbjct 21882 TCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGT 21823 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| || ||||| | || |||||| |||||||| || || Sbjct 21822 TCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCC 21763 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || || || || ||||||||||| || || ||||| | Sbjct 21762 TTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAA 21703 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | || || || || | ||||| ||||| | |||||||| Sbjct 21702 AGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCATTT 21659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479609867380