Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq69 379 2e-100
seq35 113 5e-20
>seq69
Length=709337
Score = 379 bits (420), Expect = 2e-100
Identities = 636/914 (70%), Gaps = 13/914 (1%)
Strand=Plus/Minus
Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728
||||||||| || | |||||| |||||||||||||| || || || | || || ||
Sbjct 558773 TTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAAGGAAATGTT 558714
Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788
||||||||||||||||||||| | ||||| || | |||||| || || | | |
Sbjct 558713 TTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTTTTATTACCCAAAGCAACCAA 558654
Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848
|| |||||| || ||||||| | |||| ||| | | ||||||||| || | |||
Sbjct 558653 TAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATTCATACCCAATAA 558594
Query 18849 TTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908
|||| |||| ||||| |||| ||||||| ||| || | || || || | |||||
Sbjct 558593 ACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAATAAT 558534
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968
| |||| | | | || || | | | | ||| ||| | |||||||| ||
Sbjct 558533 TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGAGCAAATAATAAACATGCGAA 558474
Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028
|||| |||| || ||||| | || || ||||| || || || ||||| || |||||
Sbjct 558473 ATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAATCCTGGCAT 558414
Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088
|| |||||||| || |||||||| ||||| |||||||| ||| || || ||||||||
Sbjct 558413 CAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAAAAGATACCTTC 558354
Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGAATCCATT 19147
|| || || |||||||| | ||| || || ||| | || || || || ||||||
Sbjct 558353 AACAGCAGCGAAAGCAACCAATCTCTCAGCA-AACAATGCCTCGGAATCTTGGATCCATC 558295
Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGAT 19207
| | |||||||||||||||||||| | || || || || |||| ||| |||| |
Sbjct 558294 TGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCAATAGCATTGAATAAAA 558235
Query 19208 ACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267
| | || | || ||| || | || | || |||||||| ||| ||||||| |
Sbjct 558234 AGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCAATAACGAGTAAGTTTCTGAGT 558175
Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327
|||| ||||| || || || |||||||| ||| || | ||||||| || || ||||
Sbjct 558174 GAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCTTCTGGAATTTGAACTT 558115
Query 19328 CACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATG 19387
|| |||| |||| ||||| ||||||||||| || ||||| || ||||| || |
Sbjct 558114 CAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCGGATGCGGCAAAGAAAG 558055
Query 19388 CTAATACATGTT----TAATAAAATGTTTTTCATCTGAGGTTAATGTAT---TCCAATCA 19440
| || | | || ||| ||| ||| | ||| | ||||| | | ||||||||
Sbjct 558054 CCAAGA-TTCTTCCGATAAAGAAACGTTCATTATC---GTTTAATTTTTCTCTCCAATCA 557999
Query 19441 TTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTA 19500
| || ||||||| |||||| | ||||||| ||||||| || |||||||| || || ||
Sbjct 557998 TGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAGCCTCAGCCTTCTTG 557939
Query 19501 TACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCT 19560
||||| | ||| || ||| | ||| || ||||| || ||| | | | | | || |||
Sbjct 557938 TACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGACATAACGACGTGTGTTCTCT 557879
Query 19561 TTAAGAATAGGTTC 19574
|| | || |||||
Sbjct 557878 TTCAAAAGTGGTTC 557865
Score = 316 bits (350), Expect = 2e-81
Identities = 1155/1808 (64%), Gaps = 37/1808 (2%)
Strand=Plus/Plus
Query 47009 TTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCAT 47068
|| ||||| ||||| ||||||||||||||||| ||| |||||||||| || |||||
Sbjct 432660 TTGTGTTCTCAAATAGTACATACCAGTCTTTAATCCTTTCTTCCATCCATAAAAGTGCAT 432719
Query 47069 ACTAGTTAATTTAGA-ATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGAT 47127
||| || |||||| || | ||| || | ||||||| || | ||||| ||||
Sbjct 432720 ACTTGTCAATTTACCCATTGTTGGGTCCTTGA-TATGAATGTTTAATGATTGTGATTGAT 432778
Query 47128 CAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATA 47187
|||| || || | ||||||| |||||||| | |||| | |||| | || ||||| |
Sbjct 432779 CAATGAAGGCTGCCCTATCAGAGGCCATATCGATAATATGCTTTTGAGAGATTTCCCACA 432838
Query 47188 CTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATTAGT---ATTTTGAATAGATCCTC 47244
|||| || || | | |||||| || || |||| || | | ||| || || ||
Sbjct 432839 CTGTCTTGTACAATGCTTTAATTTCATCGGGGATGTTTGGCAAAGCTTGGATGGAACCAT 432898
Query 47245 Cgttttctataattttgttttttaattcatttgaccaaagttttcgttcagttaatgttt 47304
|||| ||||| | | || | ||| ||||| ||| || |
Sbjct 432899 TGTTTGAAATAATACTACTCTTCATAGCATCGTTCCAAATACCCAAATCAACCAAATCCT 432958
Query 47305 ttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATAT 47364
| || | | |||||||||||||| ||||| |||| | ||||| | | || || |
Sbjct 432959 TCAACAAGTATGGATTAACAATTTGGAATTCACCAGCCAACACTCTTCTGGAGTAGATGT 433018
Query 47365 TACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAG 47424
| || |||||||| | | ||||||| || || |||||||| | || || || || |
Sbjct 433019 TCGAAGTGTATGGTTCAAAACATTCATTGTTACCCAAAATTTGTGATGTGGAAGCGGTTG 433078
Query 47425 GCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNN 47484
|||| | || || || || ||||| | |||| ||| | |
Sbjct 433079 GCATTGGAGCCACCAACAAAGAGTTTCTCATACCATGTTTGGCAAGTTTTTGTTTCAATT 433138
Query 47485 GTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTT 47544
| ||||||||| | |||| || | ||| || |||||||| | | ||||
Sbjct 433139 CATCCCAATCCCATAATTCTGTAGGCTTTCTGTCCCACAAGTCATATTGTAACAAACCTT 433198
Query 47545 TACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAAC 47604
| || || || | || |||| ||||||||| | | || || | |||| |
Sbjct 433199 GGGATGCTGGTGATCCTTGGTAGGTTTCATAAGGACCTTCTTCTTGTGCCAATTCAATAG 433258
Query 47605 TTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTC-CTTGCT 47663
||||| | ||| | ||| || ||||| || |||| ||||||| |||| || |||
Sbjct 433259 AAGCTTCAACAGCAGCGTGATAGATAGTTTCGAAAATTTGAATGTTTA-ATTCTCTAGCT 433317
Query 47664 TCTGATGATTCAAAAG-GATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACC 47722
||| || || || ||| || | ||| ||||| ||||| || ||
Sbjct 433318 TCTTGGGAATCGAATCCGAT-TCTTAAAACCATGAAGGCATCAGCCAAACCTTGGACTCC 433376
Query 47723 AATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTT 47782
| |||||||||| || | | ||||| ||||||||| || | ||| || | ||
Sbjct 433377 CAATGCAATTGGTCTGTGTCTCATGTTAGATTTCTCAGCTTCAGGGACTGGGTAATAATT 433436
Query 47783 TATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATT 47842
| ||||| | | | || | || || || || |
Sbjct 433437 CCTGTCTATGACTCTGTTCAAGTTACGAGTAACAACTTTGGTAACATCATGCAACTTGTC 433496
Query 47843 AAAAT-----CAAACTTGTT----AT-TTAT--AACAAACCTATTAAGTGCTATAGATGC 47890
||| | ||| | |||| || || | || |||| | | || || |||||
Sbjct 433497 AAAGTTGTACCAAGCGTGTTTACCATCTTGTTCAATAAACGAAGGTAAAGCAATCGATGC 433556
Query 47891 TAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATT 47950
| ||||| ||||| || || | |||| | |||| | |||||| ||| | ||
Sbjct 433557 CAAGTTACAGACAGCAACTTCGTCTGGAGCTGAGTATTCGACAATTTCACAACACAAGTT 433616
Query 47951 ACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTA 48010
| |||||||| |||| ||||| | || || ||||||| || ||||| ||
Sbjct 433617 GGAAGATTTGATAATACCTAAATTCTTTTGGTTGGACTTGGTGTTACAAGCATCCTTATA 433676
Query 48011 AAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCT 48070
| ||| || || || |||||||| | |||| ||| | ||| || | ||| | |
Sbjct 433677 CAACATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTG 433736
Query 48071 AGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAA 48130
|||||| || |||| | | || ||| ||||| || |||| ||||
Sbjct 433737 AGCCTTGATGGTTTTTCTACCACGACCTTCCCTTTCATATTTTTCGTACAACTCAACAAA 433796
Query 48131 TTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATC 48190
|| || ||||| | | | || || ||| |||||| ||| | | ||||| |||
Sbjct 433797 CTCGTCACCATAAGTGTCAGCCAATCCTGGAGCTTCATTTGGAGAGAACAATGTCCA--- 433853
Query 48191 CTCATCATTTTTT---ACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAA 48247
|||| |||||| | ||||| ||||||| | |||||| ||||| | ||| |||||
Sbjct 433854 CTCACCATTTTGTTCAACTCTCTTCATAAACAAATCTGGGATCCACAAGGCTGGGAATAA 433913
Query 48248 ATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTAT 48307
||| |||| ||| | |||||| || || ||| || | | |||| || || | ||
Sbjct 433914 ATCTCTAGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTGATCTCAATGAAATCAAAGAT 433973
Query 48308 ATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTG 48367
|||| ||||||||||| | ||| | || | ||||||||| || ||||| |||||
Sbjct 433974 ATCACTGTGCCATGGTTCAAGATACAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTG 434033
Query 48368 ATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATAT 48427
||| | ||| | |||||| ||||| |||| | | ||| |||| ||||||||| || |
Sbjct 434034 ATCAACATAACGGGCAGTGTTGTTGAAAACACGAACCATAGGGATAATACCATTAGAAGT 434093
Query 48428 ACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTA 48486
||| || || || | ||||||| ||| | | | || ||| ||| || || ||| |
Sbjct 434094 ACCGTTTGTACCAGCAATATAAGCACCAGTGGAACGAATGTTATGAATGTGCAA-ACCAA 434152
Query 48487 TACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTA 48546
||||||| || | || || |||| |||||| || | || |||||||| ||||| |
Sbjct 434153 TACCACCAGCACTCTTTGAAATTAAAGCACAAGTCTTTAAAGTGTCATAAATACCTTCAA 434212
Query 48547 TACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTG 48606
|| ||| ||| |||| | | |||||| |||||||| || | ||| || |
Sbjct 434213 TAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGGTTTTGGAGTACCAG 434272
Query 48607 AATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTT 48666
||||||||| ||||| |||| |||| || | | || | ||| ||||| ||||
Sbjct 434273 CATTAAATAAACAAGGAGAACCATGGGTAAAGTATCTTTGCGACATCAAGTTATAAGTTT 434332
Query 48667 CAATAACAGAATCT----ATATCCCATTGATGTATACCTATAGATACACGCATTAACATA 48722
|||| || ||| ||||||| | ||||||||| |||| || | ||| | || |
Sbjct 434333 CAAT----GACTCTTGGGATATCCCTTCCATGTATACCGATAGCAACTCTCATAATCAAA 434388
Query 48723 TATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTT 48782
| ||| ||||||||| | | ||| ||| || || | ||||||| |||| || |||
Sbjct 434389 TGTTGTGGTCTTTCAGCTACTTTACCATTGATACGTAACAAATATGATCTTTCTAAAGTT 434448
Query 48783 TTAAAACC 48790
|| |||||
Sbjct 434449 TTGAAACC 434456
>seq35
Length=214301
Score = 113 bits (124), Expect = 5e-20
Identities = 185/261 (71%), Gaps = 8/261 (3%)
Strand=Plus/Minus
Query 48180 AATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCT 48239
|| |||||||| || | ||| ||||| ||| || | |||||| ||||| | | |
Sbjct 164966 AACGACCAATCATCTCCTGATTTCACTCTTTGCATGAACAAATCTGGAATCCATA-ACCC 164908
Query 48240 ATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCC---ACTATTCCTTTTAAGTTCAAG 48295
||| || ||||| ||||||| |||||||||||||| | | ||||| || |||||
Sbjct 164907 ATAGAACAAATCTCTAGTTCGAAGTTCTTCATTGCCGTGATTTTTCCTCATA--TTCAA- 164851
Query 48296 AAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTT 48355
|| ||| | || ||||||||||| ||||| | ||| ||||| | | | ||||||| |||
Sbjct 164850 AATGTCAAAGATGTCAGCATGCCAAGGTTCCATATAGATTGCAAATGCTCCTGGTCTTTT 164791
Query 48356 ATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAAT 48415
|| ||||| || | ||||| || || ||||| |||| | ||||| || || |
Sbjct 164790 TCCTCCGCCTTGGTCAACATATCGTGCGGTGTTGTTGAAAACGCGCAACATGGGAACTAC 164731
Query 48416 ACCATTTGATATACCATTGGT 48436
||| ||| | ||||| ||
Sbjct 164730 CCCACCAGATCTCCCATTAGT 164710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562107816309600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |