Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq69 257 2e-63 >seq69 Length=709337 Score = 257 bits (284), Expect = 2e-63 Identities = 604/904 (67%), Gaps = 22/904 (2%) Strand=Plus/Minus Query 36811 ATTTTTCCTTCATTT--TTTAAAAATCTTCATCTAACGTAAAT---TTTATTTCCTTATT 36865 ||| | ||| ||||| |||||||||||||||| || | ||| || || ||||| Sbjct 558857 ATTATACCTCCATTTCATTTAAAAATCTTCATCAAATGCAAAAGCGTTGGCATCTTTATT 558798 Query 36866 ---ACTATT---CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATT 36919 ||| || |||||| || ||||||||| || ||||| |||| || ||||| Sbjct 558797 TTCACTCTTGGCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATT 558738 Query 36920 TGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA- 36978 ||||| || | | || || ||||||||||||||||||||||||| ||| || | Sbjct 558737 GGTCTTCCCAGCCAAGGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAAC 558678 Query 36979 --TAGTACTACATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACA 37036 | || ||| || | || | ||||| ||||||||||| | |||| ||| Sbjct 558677 TTTTTTATTACCC---AAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACA 558621 Query 37037 CATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTT 37096 ||||| || | | || ||||| | || | ||||| | ||||| || ||| ||| Sbjct 558620 CATTAATTTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTT 558561 Query 37097 TTCTATTATTACAGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTT 37156 ||| ||| ||||| || ||| || | ||| | | | | ||| || || Sbjct 558560 TTCAATTTCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTG 558501 Query 37157 TAAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAA 37216 ||||| ||| ||||||||||| |||||| ||||||||||| || | || || || Sbjct 558500 TAAATGAGCAAATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAA 558441 Query 37217 TTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGC 37276 ||| || || || |||||||||||||| ||||||||||| || | ||| || || | ||| Sbjct 558440 TTCGTTGGAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGC 558381 Query 37277 AAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAA 37336 ||| || ||| || || ||||||||||| || || || || || | | | | || Sbjct 558380 AAATGAACCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAA 558321 Query 37337 AGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTC 37396 || |||| |||||| | | | |||||| ||||| ||||| Sbjct 558320 CAATGCCTCGGAATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGG 558261 Query 37397 AATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATC 37456 ||| |||||||| || || || | ||||| ||||| ||| | || ||||| || Sbjct 558260 AATGGTTTCAATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTC 558201 Query 37457 AATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAA 37516 ||| | ||| || |||| |||||||| ||||| || || || || || || || Sbjct 558200 AATCAATAACGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAA 558141 Query 37517 ACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAAC 37576 | | ||||||| | | |||||| || |||| | | | |||||||||||||| Sbjct 558140 AGATTTAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAAC 558081 Query 37577 TATCCCATCACTAGCTGCAAAGAAAG-CAAGAACATATTTTATAAAATGTCTTTCATCAT 37635 || ||||| || |||||||||| ||||| | | ||||| | ||||| || Sbjct 558080 AATACCATCGGATGCGGCAAAGAAAGCCAAGATTCT-TCCGATAAAGAAACGTTCATTAT 558022 Query 37636 TTGATAATTTTT---TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCC 37692 |||||||| ||||||||| || |||||| |||||| | ||| ||| | |||| Sbjct 558021 CGTTTAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCC 557962 Query 37693 AAAA 37696 | || Sbjct 557961 AGAA 557958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592315763445600