Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq41 136 3e-27
seq54 122 7e-23
>seq41
Length=287713
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || || ||||| ||||| ||||| ||||| ||| ||| ||| ||||
Sbjct 13038 AATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTC 13097
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | | || ||||| || ||| |||||||| || | || ||| ||
Sbjct 13098 CGACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTATTCCACCAGACCA 13157
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| ||| | |||||||| || |||||||| ||||| || |||| | | || || ||
Sbjct 13158 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTATCTGACTACAA 13217
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||| ||||||||||||||| ||||| |||| || ||||| |||| ||
Sbjct 13218 CATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 13265
>seq54
Length=356724
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
||||||||||| || || ||||| | |||||||||||||| || ||| || |
Sbjct 21658 AAAATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTCA 21717
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | | || | || || ||| ||||| || ||| | || ||||
Sbjct 21718 TCTGACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGAT 21777
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| ||| | |||||||| || ||||||||||||||| | ||| | |||| ||
Sbjct 21778 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTAC 21837
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||||||||| ||||| ||| ||||| |||| || ||||| |||| ||
Sbjct 21838 AACATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 21887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425404074153060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |