Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq69 235 3e-57 seq35 158 6e-34 >seq69 Length=709337 Score = 235 bits (260), Expect = 3e-57 Identities = 905/1393 (65%), Gaps = 60/1393 (4%) Strand=Plus/Plus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 ||||| |||| ||| |||||||| | | ||| |||||| ||||||||||||||||| Sbjct 432985 AATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCA 433044 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 || || || || ||||| || || || || ||||||||| || | || | || ||| Sbjct 433045 TTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTT 433104 Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTAAC 25195 |||| ||||| ||| ||| | |||||| |||| ||||||||| | | ||| | || Sbjct 433105 CTCATACCATGTTTGGCAAGTTTTTGTTTCAATTCATCCCAATCCCA-TAATTCTGTAG- 433162 Query 25196 TCGATATCGTTATCATATAAATCAAATTGTAACAATCCACTTGCTGCAGGCGATTGATCA 25255 | | || | || | || ||| |||||||||| || | ||| || ||| | Sbjct 433163 --GCTTTC--TGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGG 433218 Query 25256 AAAGTTGAATATTTACCTTTTGTTATTGCCATATCTTTTGATTGCTCTAAC-GCAGCATA 25314 | ||| ||| ||||| | | ||||| || | || ||| ||| ||||| | Sbjct 433219 TAGGTTTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAA-GCTTCAACAGCAGCGTG 433277 Query 25315 ATACATATTTTCAAAAATCGCTTTGTTTAAAAACTTAGCTTTTTCTCCATCGAAAGCAAT 25374 ||| ||| |||| ||||| ||||||| |||||| || |||||| | || Sbjct 433278 ATAGATAGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGAT 433337 Query 25375 TTCCATTAAGGC--GAACGTATCTGCTAATCCCTGAACTCCTAATCCAACTGGACGATGT 25432 | | | || | ||| | ||| || || || || ||||| ||| ||| ||| | ||| Sbjct 433338 T--CTTAAAACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGT 433395 Query 25433 TTATTATTACTTATCTCAGTTTCTGATGTTGGATAGAAATTTGTATCGATCACATTATCT 25492 | | ||| | |||||| ||| | ||| || |||| | || || || | | Sbjct 433396 CTCATGTTAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTC 433455 Query 25493 AGATTCTTTATGGCAAGCTTTGTGTATTTTCT--CAACTCAATAAAGTCAAAATAAGGCT 25550 | || | ||| ||||| ||| || ||||| ||||| | ||| | Sbjct 433456 AAGTTACGAGTAACAA-CTTTG-GTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGT 433513 Query 25551 TATCGTTTAT-ATCTCTTTTTACAAATTTAGATAAAGCGATTGATGCTAAATTACAAACA 25609 ||||| |||| || | ||| || |||||| || ||||| || ||||| ||| Sbjct 433514 ----GTTTACCATCTTGTTCAATAAACGAAGGTAAAGCAATCGATGCCAAGTTACAGACA 433569 Query 25610 GCTTGTTCTTTCCCGTCAGAATATTCATTGATCTCGATACATAAGTTGCTAGATTTGATT 25669 || ||| | | || ||||| || || ||| |||||| ||||||||| Sbjct 433570 GCAACTTCGTCTGGAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATA 433629 Query 25670 ACTCCATAATTCTTTTGATTA---TTGCATGTATTGACAAT-ATCTTTATATCCTAAAT- 25724 | || |||||||||| || ||| || || |||| ||| ||||| | | || Sbjct 433630 ATACCTAAATTCTTTTGGTTGGACTTG---GTGTT-ACAAGCATCCTTATA--CAACATG 433683 Query 25725 -ATGGCGTTCCTGTTTCAATTTGAGATACTAAAATTTTCTCCCAAAGTTCTCTCGCTTTT 25783 |||| || || ||||| |||||| | | || || | ||| | | | || || Sbjct 433684 AATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTG 433743 Query 25784 AC--TTTCTTTACGAAGTTACCATCAGAAACAGCTCTTTCGTAAAGTTCAACAAATTCTT 25841 | ||| | ||| | | ||| || || | ||||||| | |||||||| || | Sbjct 433744 ATGGTTTTTCTACCACG--ACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGT 433801 Query 25842 GATTTATTTTCTCAGAGAAAAGTTTGCCATATTTATTGAGAATAATATTTGGACAGAATA 25901 | | || || |||| | | ||| | || ||||| |||| | Sbjct 433802 CACC-----------ATAAGTGTCAGCCAA--TCCTGGAGCTTCAT--TTGGAGAGAACA 433846 Query 25902 AATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCAT 25961 | ||| ||| ||||||| |||||| ||| |||||| |||||||| ||||||| || Sbjct 433847 ATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAACAAATCTGGGATCCACAAGGCTG 433906 Query 25962 AAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAAT 26021 ||||||||||| ||||| |||||||| || ||||| |||||| | | || | ||||| Sbjct 433907 GGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTGATCTCAATGAAAT 433966 Query 26022 CAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTC 26081 |||| ||||| |||||||||||| | ||| | ||||||| |||| ||| || | Sbjct 433967 CAAAGATATCACTGTGCCATGGTTCAAGATACAAAGCAAAAGCACCTGGTCTCTTGTTAC 434026 Query 26082 CACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCA 26140 |||||||||| || || | ||||| | |||||||| | ||| || | |||| ||| Sbjct 434027 CACCTTGATCAACATAACGGGCAGTGTTGTTGAAAACACGAACCATAGGGA-TAATACCA 434085 Query 26141 GTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGA 26200 | ||| |||||||| | | ||| | | || || || | ||| | ||| || Sbjct 434086 TTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAGTGGAACGAATGTTATGAATGTGC 434145 Query 26201 ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAA-TCTGAAACTGTATCGAAAAT 26259 | ||| || |||||||| | |||||||| |||||| ||| || || || |||| Sbjct 434146 AAACCAATACCACCAGCACTCTTTGAAATTAAAGCACAAGTCTTTAA-AGTGTCATAAAT 434204 Query 26260 TCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGT 26319 |||| || ||| |||||||| | | || |||||||| || | ||| | | | Sbjct 434205 ACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGGTTTTGG 434264 Query 26320 TGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTT--CACTCAAAGCT 26377 || || | ||||||||| || | | |||| ||| | |||| || || ||| Sbjct 434265 AGTACCAGCATTAAATAAACAAGGAGAACCATGGGTAAAGTATCTTTGCGACATCAAG-- 434322 Query 26378 GTATAAGTTTCAA 26390 |||||||||||| Sbjct 434323 TTATAAGTTTCAA 434335 >seq35 Length=214301 Score = 158 bits (174), Expect = 6e-34 Identities = 289/422 (68%), Gaps = 6/422 (1%) Strand=Plus/Minus Query 25886 ATATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCT 25945 |||| ||| ||||||| ||||||| | | | ||| | | ||| || |||||| Sbjct 164981 ATATCGGGAGAGAATAACGACCAATCATCTCCTGATTTCACTCTTTGCATGAACAAATCT 164922 Query 25946 GGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTT 26005 |||||||| | |||| || |||||||| | || | |||||| || |||||||| || Sbjct 164921 GGAATCCATAACCCATAGAACAAATCTCTAGTTCGAAGTTCTTCATTGCCGTGATTTTTC 164862 Query 26006 TTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTA 26065 | | || || | ||||| || || | ||||| ||||| | |||||| ||||| Sbjct 164861 CTCATATTCAAAATGTCAAAGATGTCAGCATGCCAAGGTTCCATATAGATTGCAAATGCT 164802 Query 26066 CCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAAC 26125 ||| |||||||||||| ||||| || || |||| ||| || | |||||||| |||| Sbjct 164801 CCTGGTCTTTTTCCTCCGCCTTGGTCAACATATCGTGCGGTGTTGTTGAAAACGCGCAAC 164742 Query 26126 ATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTA 26185 || ||||||| ||| || || || || ||| ||| | |||||| || ||| Sbjct 164741 ATGGGAACTACCCCACCAGATCTCCCATTAGTACTACTAATGTGCGATCCTTGCGCTCTG 164682 Query 26186 ATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT---AGCTGCACAATCT 26242 |||| |||| ||| || || || ||||||| ||| ||||| ||||| || Sbjct 164681 ATATTGTGAATATGGATCCCAATCCCACCAGAAGCTTTGGAAATCAAGGCTGC---TTCG 164625 Query 26243 GAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAA 26302 || ||| | | ||||| | ||| |||| | |||||| ||| || |||||||| Sbjct 164624 TGAAGTGTTTGATAGATTCCATCAATGGAATCATCCTTCATTGCTAGCAAGAAACAAGAT 164565 Query 26303 GA 26304 || Sbjct 164564 GA 164563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039568250500