Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq69 235 3e-57
seq35 158 6e-34
>seq69
Length=709337
Score = 235 bits (260), Expect = 3e-57
Identities = 905/1393 (65%), Gaps = 60/1393 (4%)
Strand=Plus/Plus
Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075
||||| |||| ||| |||||||| | | ||| |||||| |||||||||||||||||
Sbjct 432985 AATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCA 433044
Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135
|| || || || ||||| || || || || ||||||||| || | || | || |||
Sbjct 433045 TTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTT 433104
Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTAAC 25195
|||| ||||| ||| ||| | |||||| |||| ||||||||| | | ||| | ||
Sbjct 433105 CTCATACCATGTTTGGCAAGTTTTTGTTTCAATTCATCCCAATCCCA-TAATTCTGTAG- 433162
Query 25196 TCGATATCGTTATCATATAAATCAAATTGTAACAATCCACTTGCTGCAGGCGATTGATCA 25255
| | || | || | || ||| |||||||||| || | ||| || ||| |
Sbjct 433163 --GCTTTC--TGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGG 433218
Query 25256 AAAGTTGAATATTTACCTTTTGTTATTGCCATATCTTTTGATTGCTCTAAC-GCAGCATA 25314
| ||| ||| ||||| | | ||||| || | || ||| ||| ||||| |
Sbjct 433219 TAGGTTTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAA-GCTTCAACAGCAGCGTG 433277
Query 25315 ATACATATTTTCAAAAATCGCTTTGTTTAAAAACTTAGCTTTTTCTCCATCGAAAGCAAT 25374
||| ||| |||| ||||| ||||||| |||||| || |||||| | ||
Sbjct 433278 ATAGATAGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGAT 433337
Query 25375 TTCCATTAAGGC--GAACGTATCTGCTAATCCCTGAACTCCTAATCCAACTGGACGATGT 25432
| | | || | ||| | ||| || || || || ||||| ||| ||| ||| | |||
Sbjct 433338 T--CTTAAAACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGT 433395
Query 25433 TTATTATTACTTATCTCAGTTTCTGATGTTGGATAGAAATTTGTATCGATCACATTATCT 25492
| | ||| | |||||| ||| | ||| || |||| | || || || | |
Sbjct 433396 CTCATGTTAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTC 433455
Query 25493 AGATTCTTTATGGCAAGCTTTGTGTATTTTCT--CAACTCAATAAAGTCAAAATAAGGCT 25550
| || | ||| ||||| ||| || ||||| ||||| | ||| |
Sbjct 433456 AAGTTACGAGTAACAA-CTTTG-GTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGT 433513
Query 25551 TATCGTTTAT-ATCTCTTTTTACAAATTTAGATAAAGCGATTGATGCTAAATTACAAACA 25609
||||| |||| || | ||| || |||||| || ||||| || ||||| |||
Sbjct 433514 ----GTTTACCATCTTGTTCAATAAACGAAGGTAAAGCAATCGATGCCAAGTTACAGACA 433569
Query 25610 GCTTGTTCTTTCCCGTCAGAATATTCATTGATCTCGATACATAAGTTGCTAGATTTGATT 25669
|| ||| | | || ||||| || || ||| |||||| |||||||||
Sbjct 433570 GCAACTTCGTCTGGAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATA 433629
Query 25670 ACTCCATAATTCTTTTGATTA---TTGCATGTATTGACAAT-ATCTTTATATCCTAAAT- 25724
| || |||||||||| || ||| || || |||| ||| ||||| | | ||
Sbjct 433630 ATACCTAAATTCTTTTGGTTGGACTTG---GTGTT-ACAAGCATCCTTATA--CAACATG 433683
Query 25725 -ATGGCGTTCCTGTTTCAATTTGAGATACTAAAATTTTCTCCCAAAGTTCTCTCGCTTTT 25783
|||| || || ||||| |||||| | | || || | ||| | | | || ||
Sbjct 433684 AATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTG 433743
Query 25784 AC--TTTCTTTACGAAGTTACCATCAGAAACAGCTCTTTCGTAAAGTTCAACAAATTCTT 25841
| ||| | ||| | | ||| || || | ||||||| | |||||||| || |
Sbjct 433744 ATGGTTTTTCTACCACG--ACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGT 433801
Query 25842 GATTTATTTTCTCAGAGAAAAGTTTGCCATATTTATTGAGAATAATATTTGGACAGAATA 25901
| | || || |||| | | ||| | || ||||| |||| |
Sbjct 433802 CACC-----------ATAAGTGTCAGCCAA--TCCTGGAGCTTCAT--TTGGAGAGAACA 433846
Query 25902 AATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCAT 25961
| ||| ||| ||||||| |||||| ||| |||||| |||||||| ||||||| ||
Sbjct 433847 ATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAACAAATCTGGGATCCACAAGGCTG 433906
Query 25962 AAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAAT 26021
||||||||||| ||||| |||||||| || ||||| |||||| | | || | |||||
Sbjct 433907 GGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTGATCTCAATGAAAT 433966
Query 26022 CAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTC 26081
|||| ||||| |||||||||||| | ||| | ||||||| |||| ||| || |
Sbjct 433967 CAAAGATATCACTGTGCCATGGTTCAAGATACAAAGCAAAAGCACCTGGTCTCTTGTTAC 434026
Query 26082 CACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCA 26140
|||||||||| || || | ||||| | |||||||| | ||| || | |||| |||
Sbjct 434027 CACCTTGATCAACATAACGGGCAGTGTTGTTGAAAACACGAACCATAGGGA-TAATACCA 434085
Query 26141 GTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGA 26200
| ||| |||||||| | | ||| | | || || || | ||| | ||| ||
Sbjct 434086 TTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAGTGGAACGAATGTTATGAATGTGC 434145
Query 26201 ATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAA-TCTGAAACTGTATCGAAAAT 26259
| ||| || |||||||| | |||||||| |||||| ||| || || || ||||
Sbjct 434146 AAACCAATACCACCAGCACTCTTTGAAATTAAAGCACAAGTCTTTAA-AGTGTCATAAAT 434204
Query 26260 TCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGT 26319
|||| || ||| |||||||| | | || |||||||| || | ||| | | |
Sbjct 434205 ACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGGTTTTGG 434264
Query 26320 TGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTT--CACTCAAAGCT 26377
|| || | ||||||||| || | | |||| ||| | |||| || || |||
Sbjct 434265 AGTACCAGCATTAAATAAACAAGGAGAACCATGGGTAAAGTATCTTTGCGACATCAAG-- 434322
Query 26378 GTATAAGTTTCAA 26390
||||||||||||
Sbjct 434323 TTATAAGTTTCAA 434335
>seq35
Length=214301
Score = 158 bits (174), Expect = 6e-34
Identities = 289/422 (68%), Gaps = 6/422 (1%)
Strand=Plus/Minus
Query 25886 ATATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCT 25945
|||| ||| ||||||| ||||||| | | | ||| | | ||| || ||||||
Sbjct 164981 ATATCGGGAGAGAATAACGACCAATCATCTCCTGATTTCACTCTTTGCATGAACAAATCT 164922
Query 25946 GGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTT 26005
|||||||| | |||| || |||||||| | || | |||||| || |||||||| ||
Sbjct 164921 GGAATCCATAACCCATAGAACAAATCTCTAGTTCGAAGTTCTTCATTGCCGTGATTTTTC 164862
Query 26006 TTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTA 26065
| | || || | ||||| || || | ||||| ||||| | |||||| |||||
Sbjct 164861 CTCATATTCAAAATGTCAAAGATGTCAGCATGCCAAGGTTCCATATAGATTGCAAATGCT 164802
Query 26066 CCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAAC 26125
||| |||||||||||| ||||| || || |||| ||| || | |||||||| ||||
Sbjct 164801 CCTGGTCTTTTTCCTCCGCCTTGGTCAACATATCGTGCGGTGTTGTTGAAAACGCGCAAC 164742
Query 26126 ATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTA 26185
|| ||||||| ||| || || || || ||| ||| | |||||| || |||
Sbjct 164741 ATGGGAACTACCCCACCAGATCTCCCATTAGTACTACTAATGTGCGATCCTTGCGCTCTG 164682
Query 26186 ATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT---AGCTGCACAATCT 26242
|||| |||| ||| || || || ||||||| ||| ||||| ||||| ||
Sbjct 164681 ATATTGTGAATATGGATCCCAATCCCACCAGAAGCTTTGGAAATCAAGGCTGC---TTCG 164625
Query 26243 GAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAA 26302
|| ||| | | ||||| | ||| |||| | |||||| ||| || ||||||||
Sbjct 164624 TGAAGTGTTTGATAGATTCCATCAATGGAATCATCCTTCATTGCTAGCAAGAAACAAGAT 164565
Query 26303 GA 26304
||
Sbjct 164564 GA 164563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039568250500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |