Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq69 262 5e-65 seq70 87.8 2e-12 seq60 82.4 9e-11 >seq69 Length=709337 Score = 262 bits (290), Expect = 5e-65 Identities = 839/1288 (65%), Gaps = 29/1288 (2%) Strand=Plus/Minus Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 || ||||||||||| |||| ||| || ||||| ||| ||| | | || | || || Sbjct 434279 TTTAATGCTGGTACTCCAAAACCACAAATGTCATCTTGTTTCTTGGTTGCAATGAAAGAA 434220 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 || || || | ||||| |||| ||| | | | ||||| ||| |||||| | ||| Sbjct 434219 GATTCTATTGAAGGTATTTATGACACTTTAAAGACTTGTGCTTTAATTTCAAAGAGTGCT 434160 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || |||||||| ||||||| ||| | | | ||| | || |||| || ||| Sbjct 434159 GGTGGTATTGGTTTGCACATTCATAACATTCGTTCCACTGGTGCTTATATTGCTGGTACA 434100 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || ||| || |||||||||| || ||| |||| || || ||| ||| || || ||| Sbjct 434099 AACGGTACTTCTAATGGTATTATCCCTATGGTTCGTGTTTTCAACAACACTGCCCGTTAT 434040 Query 75569 GTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCATGG 75622 || |||||| || | |||| | || | | || | || | ||||||||| Sbjct 434039 GTTGATCAAGGTGG---TAACAAGAGACCAGGTGCTTTTGCTTTGTATCTTGAACCATGG 433983 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || |||||| | || ||| ||||| | || ||||| ||| | ||||| || | Sbjct 433982 CACAGTGATATCTTTGATTTCATTGAGATCAGAAAGAACCACGGTAAGGAAGAAA-TCAG 433924 Query 75683 TG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 | ||||||| | || || || ||||||| ||||| | || |||||| | ||||| | Sbjct 433923 AGCTAGAGATTTATTCCCAGCCTTGTGGATCCCAGATTTGTTTATGAAGAGAGTTGAACA 433864 Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 |||| | ||| | | |||| |||| | | || ||||| | | ||| | || Sbjct 433863 AAATGGTGAGTGGACATTGTTCTCTCCAAATGAAGCTCCAGGATTGGCTGACACTTATGG 433804 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 ||| ||||||| | | ||| ||| |||||| ||| ||| | | | || | Sbjct 433803 TGACGAGTTTGTTGAGTTGTACGAAAAATATGAAAGGGAAGGTCGTGGTAGAAAAACCAT 433744 Query 75862 ACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 | || | | | ||| ||| | | || | || | || || || ||||| || |||| Sbjct 433743 -CAAGGCTCAAAAGTTGTGGTACTCCATCTTGGAAGCTCAAACCGAAACTGGTACCCCAT 433685 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 ||| | || |||||||||||||||| ||| |||||||||||||| || | |||| Sbjct 433684 TCATGTTGTATAAGGATGCTTGTAACACCAAGTCCAACCAAAAGAATTTAGGTATTATCA 433625 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 | || || | || |||||| | || ||| ||| | || || ||||| | Sbjct 433624 AATCTTCCAACTTGTGTTGTGAAATTGTCGAATACTCAGCTCCAGACGAAGTTGCTGTCT 433565 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCG-CACTTTTGAT 76099 | || |||||||| || || | || || | | | |||| | ||| ||| | Sbjct 433564 GTAACTTGGCATCGATTGCTTTACCTTCGTTTATTGAACAAGATGGTAAACACGCTTGGT 433505 Query 76100 -----TATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154 | ||| || | ||||| | || || ||||||| || | ||| |||||| Sbjct 433504 ACAACTTTGACAAGTTGCATGATGTTACCAAAGTTGTTACTCGTAACTTGAACAGAGTCA 433445 Query 76155 TTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 | ||||| |||| ||| || || ||| ||| | || ||||| ||| ||||||||| Sbjct 433444 TAGACAGGAATTATTACCCAGTCCCTGAAGCTGAG---AAATCTAACATGAGACACAGAC 433388 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTG 76271 | |||| ||||| || |||||| | || |||| || || | | | || ||| | Sbjct 433387 CAATTGCATTGGGAGTCCAAGGTTTGGCTGATGCCTTCATGGTTTTAAGAATCGGATTCG 433328 Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331 |||| | ||||| | || | || || || || ||||| || |||||||| | Sbjct 433327 ATTCCCAAGAAGCTAGAGAATTAAACATTCAAATTTTCGAAACTATCTATCACGCTGCTG 433268 Query 76332 TGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTC 76391 | || || | ||||||||| ||| ||||| | ||||| || | | || || | Sbjct 433267 TTGAAGCTTCTATTGAATTGGCACAAGAAGAAGGTCCTTATGAAACCTACCAAGGATCAC 433208 Query 76392 CCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG 76451 | || |||||||| || | || | ||| ||||||| | || || | | || || | Sbjct 433207 CAGCATCCCAAGGTTTGTTACAATATGACTTGTGGGACAGA-AAGCCTA-CAGAATTATG 433150 Query 76452 --ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 76509 | ||||||| | || || | | | ||| | | ||| | | ||| | Sbjct 433149 GGATTGGGATGAATTGAAACAAAAACTTGCCAAACATGGTATGAGAAACTCTTTGTTGGT 433090 Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569 ||| ||||||||||| || ||||| ||||||| |||||||| |||||||| |||||||| Sbjct 433089 GGCTCCAATGCCAACCGCTTCCACATCACAAATTTTGGGTAACAATGAATGTTTTGAACC 433030 Query 76570 ATACACAACAAACATCTACCTGAGAAGA 76597 |||||| | ||||||||| |||||| Sbjct 433029 ATACACTTCGAACATCTACTCCAGAAGA 433002 >seq70 Length=247326 Score = 87.8 bits (96), Expect = 2e-12 Identities = 218/326 (67%), Gaps = 9/326 (3%) Strand=Plus/Minus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||| || ||||| || || || |||| | ||| || || || || || || | Sbjct 28608 TGGTGCAAAAATCCCTCGCGGTGCTATTCTTTCAGGTCCTCCGGGAACAGGTAAAACATT 28549 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAA 175393 ||||| ||||| || |||||| | ||| || || || | || |||| | Sbjct 28548 ACTCGCTAAAGCCACAGCTGGTGAAGCTGGTGTTCCGTTTTATTCTGTT-TCTGGTTCGG 28490 Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453 | ||||| || |||||||||||||| |||||| | | || || ||| | || ||| | Sbjct 28489 AATTTGTTGAAATGTTTGTTGGTGTAGGTGCCTCACGTGTACGTGATTTGTTCAAAACTG 28430 Query 175454 CCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAAC 175513 | | |||||| |||| ||||| || ||||||| |||||||| | || |||||| Sbjct 28429 CAAGAGAAAATGCTCCATCGATTGTGTTTGTTGATGAAATTGATGCAATTGGTAAGCAAA 28370 Query 175514 GCAGCGCTGGTGGTATGCCA-----GCAAATGACGAGAGAGAACAAACAATTAATCAACT 175568 | | | || | |||| | || || || ||||||||| ||| | |||||| | Sbjct 28369 G-ATCAAAGG-GAAATGCAACAGGCGCCAACGATGAGAGAGAAACTACATTGAATCAATT 28312 Query 175569 ACTCACCGAGATGGATGGCTTTGACA 175594 | | || ||||| || ||||||| Sbjct 28311 ATTGGTTGAAATGGACGGGTTTGACA 28286 >seq60 Length=402545 Score = 82.4 bits (90), Expect = 9e-11 Identities = 173/257 (67%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 27781 CCAGTAGATCCAAATCCACCCGCACCTCTCTCTGTCTCT-TCAA-----GAACACCAATT 27834 ||||| ||||||||||| || |||| | || || | | ||| | | ||||| Sbjct 120511 CCAGTCGATCCAAATCCTCCTTCACCACGTTCAGTATTTGACAATCCTTCCAAATCAATT 120570 Query 27835 TCCTGCACATCGGGTGTTTCACAGCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTC 27894 |||| || ||| | || || | || | || | ||| || || | ||| || || Sbjct 120571 TCCTCCAAATCAGCATTTACAATTCTTTCCAAAACTAATTGAGCAATTCTATCTCCCTTT 120630 Query 27895 TTTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAG 27954 || | ||||| | ||| ||| ||||| || | || ||||| |||||||| || Sbjct 120631 TTAATTTCAAAATGTTTATCTGAATGATTAAACAAGACAACTTTAACTTCACCCCGGTAA 120690 Query 27955 TCGGGATCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGT 28014 || | |||||| || || ||||| | ||| ||||| || ||||| ||||| || ||| Sbjct 120691 TCAGCATCAATTACCCCAGCACCGGTTGAAATTCCATGTTTGACAGCAAGACCTGAACGT 120750 Query 28015 GGTGCAACACGACCATA 28031 || || ||||| ||||| Sbjct 120751 GGAGCTACACGTCCATA 120767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568556003200