Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq69 262 5e-65
seq70 87.8 2e-12
seq60 82.4 9e-11
>seq69
Length=709337
Score = 262 bits (290), Expect = 5e-65
Identities = 839/1288 (65%), Gaps = 29/1288 (2%)
Strand=Plus/Minus
Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
|| ||||||||||| |||| ||| || ||||| ||| ||| | | || | || ||
Sbjct 434279 TTTAATGCTGGTACTCCAAAACCACAAATGTCATCTTGTTTCTTGGTTGCAATGAAAGAA 434220
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
|| || || | ||||| |||| ||| | | | ||||| ||| |||||| | |||
Sbjct 434219 GATTCTATTGAAGGTATTTATGACACTTTAAAGACTTGTGCTTTAATTTCAAAGAGTGCT 434160
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508
|| |||||||| ||||||| ||| | | | ||| | || |||| || |||
Sbjct 434159 GGTGGTATTGGTTTGCACATTCATAACATTCGTTCCACTGGTGCTTATATTGCTGGTACA 434100
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|| ||| || |||||||||| || ||| |||| || || ||| ||| || || |||
Sbjct 434099 AACGGTACTTCTAATGGTATTATCCCTATGGTTCGTGTTTTCAACAACACTGCCCGTTAT 434040
Query 75569 GTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCATGG 75622
|| |||||| || | |||| | || | | || | || | |||||||||
Sbjct 434039 GTTGATCAAGGTGG---TAACAAGAGACCAGGTGCTTTTGCTTTGTATCTTGAACCATGG 433983
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| |||||| | || ||| ||||| | || ||||| ||| | ||||| || |
Sbjct 433982 CACAGTGATATCTTTGATTTCATTGAGATCAGAAAGAACCACGGTAAGGAAGAAA-TCAG 433924
Query 75683 TG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741
| ||||||| | || || || ||||||| ||||| | || |||||| | ||||| |
Sbjct 433923 AGCTAGAGATTTATTCCCAGCCTTGTGGATCCCAGATTTGTTTATGAAGAGAGTTGAACA 433864
Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801
|||| | ||| | | |||| |||| | | || ||||| | | ||| | ||
Sbjct 433863 AAATGGTGAGTGGACATTGTTCTCTCCAAATGAAGCTCCAGGATTGGCTGACACTTATGG 433804
Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861
||| ||||||| | | ||| ||| |||||| ||| ||| | | | || |
Sbjct 433803 TGACGAGTTTGTTGAGTTGTACGAAAAATATGAAAGGGAAGGTCGTGGTAGAAAAACCAT 433744
Query 75862 ACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920
| || | | | ||| ||| | | || | || | || || || ||||| || ||||
Sbjct 433743 -CAAGGCTCAAAAGTTGTGGTACTCCATCTTGGAAGCTCAAACCGAAACTGGTACCCCAT 433685
Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980
||| | || |||||||||||||||| ||| |||||||||||||| || | ||||
Sbjct 433684 TCATGTTGTATAAGGATGCTTGTAACACCAAGTCCAACCAAAAGAATTTAGGTATTATCA 433625
Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040
| || || | || |||||| | || ||| ||| | || || ||||| |
Sbjct 433624 AATCTTCCAACTTGTGTTGTGAAATTGTCGAATACTCAGCTCCAGACGAAGTTGCTGTCT 433565
Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCG-CACTTTTGAT 76099
| || |||||||| || || | || || | | | |||| | ||| ||| |
Sbjct 433564 GTAACTTGGCATCGATTGCTTTACCTTCGTTTATTGAACAAGATGGTAAACACGCTTGGT 433505
Query 76100 -----TATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154
| ||| || | ||||| | || || ||||||| || | ||| ||||||
Sbjct 433504 ACAACTTTGACAAGTTGCATGATGTTACCAAAGTTGTTACTCGTAACTTGAACAGAGTCA 433445
Query 76155 TTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211
| ||||| |||| ||| || || ||| ||| | || ||||| ||| |||||||||
Sbjct 433444 TAGACAGGAATTATTACCCAGTCCCTGAAGCTGAG---AAATCTAACATGAGACACAGAC 433388
Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTG 76271
| |||| ||||| || |||||| | || |||| || || | | | || ||| |
Sbjct 433387 CAATTGCATTGGGAGTCCAAGGTTTGGCTGATGCCTTCATGGTTTTAAGAATCGGATTCG 433328
Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331
|||| | ||||| | || | || || || || ||||| || |||||||| |
Sbjct 433327 ATTCCCAAGAAGCTAGAGAATTAAACATTCAAATTTTCGAAACTATCTATCACGCTGCTG 433268
Query 76332 TGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTC 76391
| || || | ||||||||| ||| ||||| | ||||| || | | || || |
Sbjct 433267 TTGAAGCTTCTATTGAATTGGCACAAGAAGAAGGTCCTTATGAAACCTACCAAGGATCAC 433208
Query 76392 CCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG 76451
| || |||||||| || | || | ||| ||||||| | || || | | || || |
Sbjct 433207 CAGCATCCCAAGGTTTGTTACAATATGACTTGTGGGACAGA-AAGCCTA-CAGAATTATG 433150
Query 76452 --ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 76509
| ||||||| | || || | | | ||| | | ||| | | ||| |
Sbjct 433149 GGATTGGGATGAATTGAAACAAAAACTTGCCAAACATGGTATGAGAAACTCTTTGTTGGT 433090
Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569
||| ||||||||||| || ||||| ||||||| |||||||| |||||||| ||||||||
Sbjct 433089 GGCTCCAATGCCAACCGCTTCCACATCACAAATTTTGGGTAACAATGAATGTTTTGAACC 433030
Query 76570 ATACACAACAAACATCTACCTGAGAAGA 76597
|||||| | ||||||||| ||||||
Sbjct 433029 ATACACTTCGAACATCTACTCCAGAAGA 433002
>seq70
Length=247326
Score = 87.8 bits (96), Expect = 2e-12
Identities = 218/326 (67%), Gaps = 9/326 (3%)
Strand=Plus/Minus
Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334
|||||| || ||||| || || || |||| | ||| || || || || || || |
Sbjct 28608 TGGTGCAAAAATCCCTCGCGGTGCTATTCTTTCAGGTCCTCCGGGAACAGGTAAAACATT 28549
Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAA 175393
||||| ||||| || |||||| | ||| || || || | || |||| |
Sbjct 28548 ACTCGCTAAAGCCACAGCTGGTGAAGCTGGTGTTCCGTTTTATTCTGTT-TCTGGTTCGG 28490
Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453
| ||||| || |||||||||||||| |||||| | | || || ||| | || ||| |
Sbjct 28489 AATTTGTTGAAATGTTTGTTGGTGTAGGTGCCTCACGTGTACGTGATTTGTTCAAAACTG 28430
Query 175454 CCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAAC 175513
| | |||||| |||| ||||| || ||||||| |||||||| | || ||||||
Sbjct 28429 CAAGAGAAAATGCTCCATCGATTGTGTTTGTTGATGAAATTGATGCAATTGGTAAGCAAA 28370
Query 175514 GCAGCGCTGGTGGTATGCCA-----GCAAATGACGAGAGAGAACAAACAATTAATCAACT 175568
| | | || | |||| | || || || ||||||||| ||| | |||||| |
Sbjct 28369 G-ATCAAAGG-GAAATGCAACAGGCGCCAACGATGAGAGAGAAACTACATTGAATCAATT 28312
Query 175569 ACTCACCGAGATGGATGGCTTTGACA 175594
| | || ||||| || |||||||
Sbjct 28311 ATTGGTTGAAATGGACGGGTTTGACA 28286
>seq60
Length=402545
Score = 82.4 bits (90), Expect = 9e-11
Identities = 173/257 (67%), Gaps = 6/257 (2%)
Strand=Plus/Plus
Query 27781 CCAGTAGATCCAAATCCACCCGCACCTCTCTCTGTCTCT-TCAA-----GAACACCAATT 27834
||||| ||||||||||| || |||| | || || | | ||| | | |||||
Sbjct 120511 CCAGTCGATCCAAATCCTCCTTCACCACGTTCAGTATTTGACAATCCTTCCAAATCAATT 120570
Query 27835 TCCTGCACATCGGGTGTTTCACAGCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTC 27894
|||| || ||| | || || | || | || | ||| || || | ||| || ||
Sbjct 120571 TCCTCCAAATCAGCATTTACAATTCTTTCCAAAACTAATTGAGCAATTCTATCTCCCTTT 120630
Query 27895 TTTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAG 27954
|| | ||||| | ||| ||| ||||| || | || ||||| |||||||| ||
Sbjct 120631 TTAATTTCAAAATGTTTATCTGAATGATTAAACAAGACAACTTTAACTTCACCCCGGTAA 120690
Query 27955 TCGGGATCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGT 28014
|| | |||||| || || ||||| | ||| ||||| || ||||| ||||| || |||
Sbjct 120691 TCAGCATCAATTACCCCAGCACCGGTTGAAATTCCATGTTTGACAGCAAGACCTGAACGT 120750
Query 28015 GGTGCAACACGACCATA 28031
|| || ||||| |||||
Sbjct 120751 GGAGCTACACGTCCATA 120767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596568556003200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |