Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq54 178 2e-39
seq41 154 3e-32
>seq54
Length=356724
Score = 178 bits (196), Expect = 2e-39
Identities = 178/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | |||| ||||| || | || || ||| || ||||||||
Sbjct 21888 ACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGA 21829
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| ||||| ||| || |||||||| || ||||| || ||||| |||||||| |||||
Sbjct 21828 TAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGG 21769
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|||||||| || ||||| || |||| ||| | ||| ||| || || || ||||||||
Sbjct 21768 GATTCCTTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAAC 21709
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||| | ||| || |||||||| || || ||||| || || |||||||||||
Sbjct 21708 TTCCAAAGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658
>seq41
Length=287713
Score = 154 bits (170), Expect = 3e-32
Identities = 175/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 193127 TTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATA 193186
||| | |||||||||||||| | |||| ||||| |||| ||||| || || ||
Sbjct 13272 TTAAAAACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTA 13213
Query 193187 GTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATC 193246
||| |||| |||||| || ||||||||||| || ||||| || ||||| ||||| ||
Sbjct 13212 GTCAGATAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTC 13153
Query 193247 AGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGA 193306
|| || || |||||||| || || || || | || | ||| |||||| ||||||||
Sbjct 13152 TGGTGGAATACCTTCTTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGA 13093
Query 193307 CTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
|||||||| | || || || ||||| |||| ||||| || || |||||||||
Sbjct 13092 TTCAACTTCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATT 13038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899652825604800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |