Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq69 268 2e-66
seq41 152 9e-32
seq54 147 4e-30
>seq69
Length=709337
Score = 268 bits (296), Expect = 2e-66
Identities = 392/546 (72%), Gaps = 15/546 (3%)
Strand=Plus/Minus
Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890
|||||| || ||||||||| | ||||| || || || || || || | || || ||
Sbjct 558773 TTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAAGGAAATGTT 558714
Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATA 38949
| |||||||||||||||||| || ||| ||| ||||| | || | | | || |
Sbjct 558713 TTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTTT-TATTACCCAAAGCAACCA 558655
Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATA 39009
|||||||||| || |||||||| |||||||| ||||||||| |||||||||||||||||
Sbjct 558654 ATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATTCATACCCAATA 558595
Query 39010 ATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatta 39069
| ||| |||||| |||||| || ||||||||||| ||||| ||||||| |||| |
Sbjct 558594 AACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTCAGTAATAA 558535
Query 39070 tcataattatattattttttga--taatttatatttaatatgattcgcatataGTAAACA 39127
| | || | || ||| || | | ||| || | |||| ||| ||| ||||||
Sbjct 558534 T--TCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGA---GCAAATAATAAACA 558480
Query 39128 TGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 39187
||| ||||| || |||||||||||||| | | | || ||||| || |||||||||||
Sbjct 558479 TGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTTAATCC 558420
Query 39188 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAA---AACTACTAGAAAAGAA 39244
|||||| || ||||| || || | ||| || || ||||||| ||| ||| |||| ||
Sbjct 558419 TGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACT-GAAA--AA 558363
Query 39245 TATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAA 39304
||||| || ||| || || || | | ||| | |||||| | | ||||
Sbjct 558362 GATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCGGAATCTTG 558303
Query 39305 AATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTT 39364
||||| | ||||||||||| || || ||||| || || || |||| ||||| ||
Sbjct 558302 GATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCAATAGCATT 558243
Query 39365 AAATAA 39370
|||||
Sbjct 558242 GAATAA 558237
>seq41
Length=287713
Score = 152 bits (168), Expect = 9e-32
Identities = 173/232 (75%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 171839 AATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATC 171898
|| ||||||||| | || || || || || ||||||| ||||| || || || ||
Sbjct 13269 AAAACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTC 13210
Query 171899 TGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958
|||| || || |||| || ||||||||||||||||| || ||||| |||||||| ||
Sbjct 13209 AGATAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGG 13150
Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018
||| || |||||||| || || || ||| || ||||| ||||| || || |||||
Sbjct 13149 TGGAATACCTTCTTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTC 13090
Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | || ||||| ||||| ||||| ||||| | ||| || ||||||
Sbjct 13089 AACTTCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATT 13038
>seq54
Length=356724
Score = 147 bits (162), Expect = 4e-30
Identities = 176/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || || ||||| | || || ||| ||
Sbjct 21896 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTG 21837
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || ||||| | || | | || |||||||||||||||||||| || ||||| |||||
Sbjct 21836 TAGTCGGATAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGA 21777
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|| || || |||||||| || ||||| || || ||| ||||| || || || ||
Sbjct 21776 TCTGGAGGGATTCCTTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATGGTGTCAGAT 21717
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| || ||||| | ||| ||||||||||| || | ||||||| ||| || ||||||||
Sbjct 21716 GACTCAACTTCCAAAGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905134416012000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |