Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq69 176 1e-38
seq70 113 1e-19
seq27 107 6e-18
>seq69
Length=709337
Score = 176 bits (194), Expect = 1e-38
Identities = 434/651 (67%), Gaps = 23/651 (4%)
Strand=Plus/Plus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
|||||| ||||| ||||| |||| ||| ||| ||||| | ||||||||||| |||||
Sbjct 433590 GTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTTTGGTT 433649
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|| || |||||||||||||||| || | ||| ||||||| || || || | || ||
Sbjct 433650 GGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTTGAGC 433709
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCC 155807
|||| || ||| | | | || || || | || || || | ||||||
Sbjct 433710 TTCCAAGATGGAGTACCACAACTTTTGAGCCTTGAT--GGTTTTTCTACCACGACCTTCC 433767
Query 155808 GACTCATATTTCATATACAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAG 155865
|||||||| |||| | || || || ||||| ||| ||| || ||| |
Sbjct 433768 CTTTCATATTTTTCGTACAAC--TCAACAAACTCGTCACCATAAGTGTCAGCCAATCCTG 433825
Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAA-----ATTTTATTACCGATTACACGCTCCAT 155920
| | || || | |||| | ||| ||||| || || | || |||
Sbjct 433826 GAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCA-----ACTCTCTTCAT 433880
Query 155921 AAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGC 155979
||| | ||| ||| | || ||| | || || || | ||| | || | | |
Sbjct 433881 AAACAAATCTGGGATCCACAAGGCTGGGAATAAATCTCTAGC-TCTGATTTCTTCCTTAC 433939
Query 155980 CGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACA 156039
|||| ||||| | | ||| | ||| || |||||| || ||| || |||||||
Sbjct 433940 CGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACA 433999
Query 156040 TAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGA 156096
||||||| ||| |||||| ||||| ||||| ||||| || ||||| || ||||
Sbjct 434000 AAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGA 434059
Query 156097 AGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAAC 156156
| |||| | |||||| ||||||||||| ||||| || || || || ||||| | ||
Sbjct 434060 AAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCAC 434119
Query 156157 CAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAG 156216
||| || |||| |||||||| || | ||||||||||| | | || |||||| ||
Sbjct 434120 CAGTGGAACGAATGTTATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAG 434179
Query 156217 CGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTG 156267
| || ||||| ||| | ||||||||||||||||||| |||| |||||
Sbjct 434180 CACAAGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTG 434230
Score = 109 bits (120), Expect = 2e-18
Identities = 459/712 (64%), Gaps = 22/712 (3%)
Strand=Plus/Plus
Query 133226 ATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAG--GAACACGGT 133283
|| || || || ||||| || |||||||||||| |||||| || | ||| || |
Sbjct 558048 ATCTTGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAAAACTTGGTGGAAAACTTT 558107
Query 133284 TTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGG 133343
| | | ||||||||| | | ||||| | || || || | || ||| |||||
Sbjct 558108 TCA--GCTGAAGTTCAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTATGATGG 558165
Query 133344 AAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCC 133403
|||| || || || || || || | ||||| ||||||||||| ||| |
Sbjct 558166 AAAACATTCACTCAGAAACTTACTCGTTATTGATTGAAACTTACATCAAGGATCCAAA-- 558223
Query 133404 AGAAGC--ACAAACTATTCAACGCCATT--AGCGAATTTCCTTGTATTAAAAAGAAATCT 133459
|||||| || ||||||| || ||| | | | |||| ||||||||||| ||
Sbjct 558224 AGAAGCTGACTTTTTATTCAATGCTATTGAAACCA--TTCCGCAAATTAAAAAGAAGGCT 558281
Query 133460 GACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT-TTTGCTACTCGTCTCGTTGC 133518
|| ||||| || | ||||||||| || || | | | |||||| | | |||||
Sbjct 558282 GATTGGGCCATCAGATGGATCCAAGA-TTCCGAGGCATTGTTTGCTGAGAGATTGGTTGC 558340
Query 133519 TTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTA 133577
||| |||| || || || || |||||||||||| | || ||| |||||||| ||| | |
Sbjct 558341 TTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATT-TGCATCTATTTTCTGGTTGA 558399
Query 133578 AAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGG 133637
| || | ||| | | || ||| | ||| || |||||| | |||| | ||||| |
Sbjct 558400 AGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAAG 558459
Query 133638 CACTTCACACCGAATTTGCCGTTTTACTTCACTCTAAATTAGAGC---GACCACTCAAAA 133694
| ||||| || || || |||| | || | ||| | | ||||| ||
Sbjct 558460 GTTTACACACTGATTTCGCATGTTTATTATTTGCTCATTTACAACATAGACCAGATCCAA 558519
Query 133695 AGAATAAGATTGAAGAAATTATTAGAGAAGCGGTTGAAATTGAGGTTGAATTTATCAATA 133754
|| | ||||| |||||||| ||||| ||||||||||| ||||| | | |
Sbjct 558520 AG---ATCGTTGAAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTACTG 558576
Query 133755 GTGCTCTGCCGTGCCGTTTAATTGGTATGAATGATGTGCTGATGCAGCGTTATATTGAAT 133814
|||| | || ||||| | ||||||||| | | ||| | ||| | ||||
Sbjct 558577 ATGCTTTACCAGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTCGAAT 558636
Query 133815 TTGTAGCTGACAGATTGGCCGTTCAGTTAGGTGGGGATAAGATTTACGGTTCCGCCAATC 133874
|||| ||||| ||||| ||| || ||| | || ||||| | | | ||||
Sbjct 558637 TTGTTGCTGATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTTTACAATGTCACTAATC 558696
Query 133875 CATTCGACTGGATGGAGAGCATTAGCATTGAATCAAAGACTAATTTCTTCGA 133926
|||| || | ||||| | |||| | | | ||||| |||||||| ||
Sbjct 558697 CATTTGATTTTATGGAAAACATTTCCTTGGCTGGGAAGACCAATTTCTTTGA 558748
>seq70
Length=247326
Score = 113 bits (124), Expect = 1e-19
Identities = 235/345 (68%), Gaps = 5/345 (1%)
Strand=Plus/Plus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAAT 288942
||||| ||||| | ||| ||||| | ||||||||||||| | || || | |||
Sbjct 28234 TCTAAGATATCAGGTCTATTTGTACCGGCCAATACAACAACATGGTCAGTACTGTCAAAC 28293
Query 288943 CCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTT 289002
|| ||||| || | |||||| | ||| ||| || ||||| || | ||| ||
Sbjct 28294 CCGTCCATTTCAACCAATAATTGATTCAATGTAGTTTCTCTCTCATCGTTGGCGCCTGTT 28353
Query 289003 GAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACA 289062
| || ||| | | || ||| ||||||| ||||||||||| |||| || | |
Sbjct 28354 GCATTTCCCT--TTGATC-TTTGCTTACCAATTGCATCAATTTCATCAACAAACACAATC 28410
Query 289063 CACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCA 289122
| |||| ||||| ||| ||| || || || || | |||||| || || || | ||||
Sbjct 28411 GATGGAGCATTTTCTCTTGCAGTTTTGAACAAATCACGTACACGTGAGGCACCTACACCA 28470
Query 289123 ACATACATTTCTACAAATTCAGAAGCGGATACTTGAAT-GAATGTTACATTTGCTTCGCC 289181
||| ||||||| |||||||| ||| | || || |||| || | ||| ||||| ||
Sbjct 28471 ACAAACATTTCAACAAATTCCGAACCAGAAAC-AGAATAAAACGGAACACCAGCTTCACC 28529
Query 289182 TGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226
||| || | || || | ||| ||||||||||| || || ||
Sbjct 28530 AGCTGTGGCTTTAGCGAGTAATGTTTTACCTGTTCCCGGAGGACC 28574
>seq27
Length=151770
Score = 107 bits (118), Expect = 6e-18
Identities = 206/302 (68%), Gaps = 4/302 (1%)
Strand=Plus/Plus
Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624
|||||| ||||||| | ||||| |||||||| ||||||||||| ||| | || ||
Sbjct 13228 CATAATATCTTCCAAAGCCTTGACCAAACGACGTTGAATATAACCCGTTTCTGCAGTCTT 13287
Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
||||| |||||||| ||||| | | |||| |||| ||||||||||| | ||||| ||
Sbjct 13288 AACAGCAGTATCAATAAGACCTTCTCTACCAGCCATTGCATGGAAGAAAAACTCTTGTGG 13347
Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744
|| || | | | | ||| | ||||| ||||| | ||||| |||| ||
Sbjct 13348 AGTTAAACCTCTCAAATAAGAGTTTTCAACAAAACCCTTTGATTCGGGGGAATAATCATC 13407
Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804
||||| || || |||| | | || || | || | || || | ||||| || ||
Sbjct 13408 TTTGGTGAAATGAGGCAATGAACGGTCAGCAAAACCAAAAGGAATTCTTTTTCCTTCGAC 13467
Query 302805 GTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATCACTGCCCTTGGAG 302862
| ||||| || | || | |||||||||||| || ||||| | ||||||||
Sbjct 13468 AATTTGCTGACCGACACATGCCGACATCTGCGAAATGTTGATAAATGA--ACCCTTGGAA 13525
Query 302863 CC 302864
||
Sbjct 13526 CC 13527
Score = 93.3 bits (102), Expect = 1e-13
Identities = 115/154 (75%), Gaps = 5/154 (3%)
Strand=Plus/Plus
Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874
|||||||| || | |||||||| ||| || || ||| || | ||||||||| |
Sbjct 12460 AATTTCTTTAAGTCTTGGAACACCCAAGGTGACATT---CTTTGAAGAGACACCAGCATA 12516
Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934
||||| ||||||| || | |||||||| |||||||||||| ||| || |||| |
Sbjct 12517 ATGGAATGTATTCAACGTCATTTGAGTAGCTGGCTCACCAATGGATTGAGCAGCAACAAC 12576
Query 301935 ACCAACCATTTCTCC-TGGTGCTACAATAGACTT 301967
|||||||||||| || ||||| ||||| || ||
Sbjct 12577 ACCAACCATTTCACCAGGGTGC-ACAATCGATTT 12609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471814959927180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |