Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq69 176 1e-38 seq70 113 1e-19 seq27 107 6e-18 >seq69 Length=709337 Score = 176 bits (194), Expect = 1e-38 Identities = 434/651 (67%), Gaps = 23/651 (4%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 |||||| ||||| ||||| |||| ||| ||| ||||| | ||||||||||| ||||| Sbjct 433590 GTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTTTGGTT 433649 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || || |||||||||||||||| || | ||| ||||||| || || || | || || Sbjct 433650 GGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTTGAGC 433709 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCC 155807 |||| || ||| | | | || || || | || || || | |||||| Sbjct 433710 TTCCAAGATGGAGTACCACAACTTTTGAGCCTTGAT--GGTTTTTCTACCACGACCTTCC 433767 Query 155808 GACTCATATTTCATATACAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAG 155865 |||||||| |||| | || || || ||||| ||| ||| || ||| | Sbjct 433768 CTTTCATATTTTTCGTACAAC--TCAACAAACTCGTCACCATAAGTGTCAGCCAATCCTG 433825 Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAA-----ATTTTATTACCGATTACACGCTCCAT 155920 | | || || | |||| | ||| ||||| || || | || ||| Sbjct 433826 GAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCA-----ACTCTCTTCAT 433880 Query 155921 AAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGC 155979 ||| | ||| ||| | || ||| | || || || | ||| | || | | | Sbjct 433881 AAACAAATCTGGGATCCACAAGGCTGGGAATAAATCTCTAGC-TCTGATTTCTTCCTTAC 433939 Query 155980 CGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACA 156039 |||| ||||| | | ||| | ||| || |||||| || ||| || ||||||| Sbjct 433940 CGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACA 433999 Query 156040 TAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGA 156096 ||||||| ||| |||||| ||||| ||||| ||||| || ||||| || |||| Sbjct 434000 AAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTGA 434059 Query 156097 AGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAAC 156156 | |||| | |||||| ||||||||||| ||||| || || || || ||||| | || Sbjct 434060 AAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCAC 434119 Query 156157 CAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAG 156216 ||| || |||| |||||||| || | ||||||||||| | | || |||||| || Sbjct 434120 CAGTGGAACGAATGTTATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAG 434179 Query 156217 CGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTG 156267 | || ||||| ||| | ||||||||||||||||||| |||| ||||| Sbjct 434180 CACAAGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTG 434230 Score = 109 bits (120), Expect = 2e-18 Identities = 459/712 (64%), Gaps = 22/712 (3%) Strand=Plus/Plus Query 133226 ATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAG--GAACACGGT 133283 || || || || ||||| || |||||||||||| |||||| || | ||| || | Sbjct 558048 ATCTTGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAAAACTTGGTGGAAAACTTT 558107 Query 133284 TTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGG 133343 | | | ||||||||| | | ||||| | || || || | || ||| ||||| Sbjct 558108 TCA--GCTGAAGTTCAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTATGATGG 558165 Query 133344 AAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCC 133403 |||| || || || || || || | ||||| ||||||||||| ||| | Sbjct 558166 AAAACATTCACTCAGAAACTTACTCGTTATTGATTGAAACTTACATCAAGGATCCAAA-- 558223 Query 133404 AGAAGC--ACAAACTATTCAACGCCATT--AGCGAATTTCCTTGTATTAAAAAGAAATCT 133459 |||||| || ||||||| || ||| | | | |||| ||||||||||| || Sbjct 558224 AGAAGCTGACTTTTTATTCAATGCTATTGAAACCA--TTCCGCAAATTAAAAAGAAGGCT 558281 Query 133460 GACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT-TTTGCTACTCGTCTCGTTGC 133518 || ||||| || | ||||||||| || || | | | |||||| | | ||||| Sbjct 558282 GATTGGGCCATCAGATGGATCCAAGA-TTCCGAGGCATTGTTTGCTGAGAGATTGGTTGC 558340 Query 133519 TTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTA 133577 ||| |||| || || || || |||||||||||| | || ||| |||||||| ||| | | Sbjct 558341 TTTCGCTGCTGTTGAAGGTATCTTTTTCAGTGGTTCATT-TGCATCTATTTTCTGGTTGA 558399 Query 133578 AAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGG 133637 | || | ||| | | || ||| | ||| || |||||| | |||| | ||||| | Sbjct 558400 AGAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAAG 558459 Query 133638 CACTTCACACCGAATTTGCCGTTTTACTTCACTCTAAATTAGAGC---GACCACTCAAAA 133694 | ||||| || || || |||| | || | ||| | | ||||| || Sbjct 558460 GTTTACACACTGATTTCGCATGTTTATTATTTGCTCATTTACAACATAGACCAGATCCAA 558519 Query 133695 AGAATAAGATTGAAGAAATTATTAGAGAAGCGGTTGAAATTGAGGTTGAATTTATCAATA 133754 || | ||||| |||||||| ||||| ||||||||||| ||||| | | | Sbjct 558520 AG---ATCGTTGAAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTACTG 558576 Query 133755 GTGCTCTGCCGTGCCGTTTAATTGGTATGAATGATGTGCTGATGCAGCGTTATATTGAAT 133814 |||| | || ||||| | ||||||||| | | ||| | ||| | |||| Sbjct 558577 ATGCTTTACCAGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTCGAAT 558636 Query 133815 TTGTAGCTGACAGATTGGCCGTTCAGTTAGGTGGGGATAAGATTTACGGTTCCGCCAATC 133874 |||| ||||| ||||| ||| || ||| | || ||||| | | | |||| Sbjct 558637 TTGTTGCTGATAGATTATTGGTTGCTTTGGGTAATAAAAAAGTTTACAATGTCACTAATC 558696 Query 133875 CATTCGACTGGATGGAGAGCATTAGCATTGAATCAAAGACTAATTTCTTCGA 133926 |||| || | ||||| | |||| | | | ||||| |||||||| || Sbjct 558697 CATTTGATTTTATGGAAAACATTTCCTTGGCTGGGAAGACCAATTTCTTTGA 558748 >seq70 Length=247326 Score = 113 bits (124), Expect = 1e-19 Identities = 235/345 (68%), Gaps = 5/345 (1%) Strand=Plus/Plus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAAT 288942 ||||| ||||| | ||| ||||| | ||||||||||||| | || || | ||| Sbjct 28234 TCTAAGATATCAGGTCTATTTGTACCGGCCAATACAACAACATGGTCAGTACTGTCAAAC 28293 Query 288943 CCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTT 289002 || ||||| || | |||||| | ||| ||| || ||||| || | ||| || Sbjct 28294 CCGTCCATTTCAACCAATAATTGATTCAATGTAGTTTCTCTCTCATCGTTGGCGCCTGTT 28353 Query 289003 GAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACA 289062 | || ||| | | || ||| ||||||| ||||||||||| |||| || | | Sbjct 28354 GCATTTCCCT--TTGATC-TTTGCTTACCAATTGCATCAATTTCATCAACAAACACAATC 28410 Query 289063 CACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCA 289122 | |||| ||||| ||| ||| || || || || | |||||| || || || | |||| Sbjct 28411 GATGGAGCATTTTCTCTTGCAGTTTTGAACAAATCACGTACACGTGAGGCACCTACACCA 28470 Query 289123 ACATACATTTCTACAAATTCAGAAGCGGATACTTGAAT-GAATGTTACATTTGCTTCGCC 289181 ||| ||||||| |||||||| ||| | || || |||| || | ||| ||||| || Sbjct 28471 ACAAACATTTCAACAAATTCCGAACCAGAAAC-AGAATAAAACGGAACACCAGCTTCACC 28529 Query 289182 TGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226 ||| || | || || | ||| ||||||||||| || || || Sbjct 28530 AGCTGTGGCTTTAGCGAGTAATGTTTTACCTGTTCCCGGAGGACC 28574 >seq27 Length=151770 Score = 107 bits (118), Expect = 6e-18 Identities = 206/302 (68%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 |||||| ||||||| | ||||| |||||||| ||||||||||| ||| | || || Sbjct 13228 CATAATATCTTCCAAAGCCTTGACCAAACGACGTTGAATATAACCCGTTTCTGCAGTCTT 13287 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 ||||| |||||||| ||||| | | |||| |||| ||||||||||| | ||||| || Sbjct 13288 AACAGCAGTATCAATAAGACCTTCTCTACCAGCCATTGCATGGAAGAAAAACTCTTGTGG 13347 Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744 || || | | | | ||| | ||||| ||||| | ||||| |||| || Sbjct 13348 AGTTAAACCTCTCAAATAAGAGTTTTCAACAAAACCCTTTGATTCGGGGGAATAATCATC 13407 Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804 ||||| || || |||| | | || || | || | || || | ||||| || || Sbjct 13408 TTTGGTGAAATGAGGCAATGAACGGTCAGCAAAACCAAAAGGAATTCTTTTTCCTTCGAC 13467 Query 302805 GTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATCACTGCCCTTGGAG 302862 | ||||| || | || | |||||||||||| || ||||| | |||||||| Sbjct 13468 AATTTGCTGACCGACACATGCCGACATCTGCGAAATGTTGATAAATGA--ACCCTTGGAA 13525 Query 302863 CC 302864 || Sbjct 13526 CC 13527 Score = 93.3 bits (102), Expect = 1e-13 Identities = 115/154 (75%), Gaps = 5/154 (3%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||||| || | |||||||| ||| || || ||| || | ||||||||| | Sbjct 12460 AATTTCTTTAAGTCTTGGAACACCCAAGGTGACATT---CTTTGAAGAGACACCAGCATA 12516 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 ||||| ||||||| || | |||||||| |||||||||||| ||| || |||| | Sbjct 12517 ATGGAATGTATTCAACGTCATTTGAGTAGCTGGCTCACCAATGGATTGAGCAGCAACAAC 12576 Query 301935 ACCAACCATTTCTCC-TGGTGCTACAATAGACTT 301967 |||||||||||| || ||||| ||||| || || Sbjct 12577 ACCAACCATTTCACCAGGGTGC-ACAATCGATTT 12609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814959927180