Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq41 132 4e-26
seq54 109 5e-19
>seq41
Length=287713
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
||||||||| || ||||||||||||||||| || ||||| ||| | ||| || ||
Sbjct 13038 AATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTC 13097
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
||| ||| | | | | || || ||||| ||||||||||| | || || ||
Sbjct 13098 CGACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTATTCCACCAGACCA 13157
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
||||||| | || | ||| |||||||| | || || | ||||| | | || |||||
Sbjct 13158 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTATCTGACTACAA 13217
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||| |||||||||||||| |||||| ||||||| ||| || |||| ||
Sbjct 13218 CATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 13265
>seq54
Length=356724
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
||||||||||| || || ||||| | || || |||||||| || | ||| ||| |
Sbjct 21658 AAAATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTCA 21717
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
|| || | | | | || ||| ||||| ||||| ||||| | || |||
Sbjct 21718 TCTGACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGAT 21777
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
||||||||| | || | ||| |||||||| |||| |||| ||||| | | || |||
Sbjct 21778 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTAC 21837
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||||||||| ||||| || |||||| |||| || ||| || |||| ||
Sbjct 21838 AACATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 21887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412840895589020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |