Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq41 140 5e-28
seq54 116 6e-21
>seq41
Length=287713
Score = 140 bits (154), Expect = 5e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| ||||| || || || || || | || || ||| | ||
Sbjct 13040 TGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCCG 13099
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| || ||| || || |||||||| |||||||| || ||||
Sbjct 13100 ACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTATTCCACCAGACCAAC 13159
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || ||||| |||||||||||||| || |||||| || | || || || |
Sbjct 13160 AAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTATCTGACTACAACA 13219
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
| ||||||||||| ||| | || || || || |||| ||||| |||
Sbjct 13220 TCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 13266
>seq54
Length=356724
Score = 116 bits (128), Expect = 6e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
||||||| ||| | ||||| | || || ||||| || ||| | || || || |||
Sbjct 21662 TGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTCATCT- 21720
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| || ||| | ||||| ||| || || ||| || ||||| || || || ||||||
Sbjct 21721 GACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGATCAA 21780
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|||||| | || ||||| ||||||||||| || ||| ||||| ||| | || || ||
Sbjct 21781 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTACAAC 21840
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
|| ||||| ||||| ||| | || || || || |||| ||||| |||
Sbjct 21841 ATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 21888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786165024208800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |