Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq41 192 1e-43
seq54 174 3e-38
>seq41
Length=287713
Score = 192 bits (212), Expect = 1e-43
Identities = 180/229 (79%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||||| |||||||||||| || || || || |||||
Sbjct 13266 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 13207
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|||| ||||||||||||||| |||||| ||||||||||| | ||||||||| ||||| ||
Sbjct 13206 TAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 13147
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| ||||| || || || ||||| | || ||||| ||||| || || || ||| ||
Sbjct 13146 AATACCTTCTTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAAC 13087
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||||| || || ||||| || || || || || || || || ||||||
Sbjct 13086 TTCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATT 13038
>seq54
Length=356724
Score = 174 bits (192), Expect = 3e-38
Identities = 176/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||||| ||| ||||| || || || || || || ||
Sbjct 21888 ACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGA 21829
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| |||| || ||||| | |||||| ||||||||||| | ||||||||||||||||||
Sbjct 21828 TAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGG 21769
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
||||||||||| ||||| ||||| | ||| ||||| ||||| || ||| | || ||
Sbjct 21768 GATTCCTTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAAC 21709
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||||||| || || || || || | || || || || || ||||||
Sbjct 21708 TTCCAAAGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCATT 21660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981825438847460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |