Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq69 224 2e-53
seq35 161 2e-34
seq7 125 2e-23
seq27 109 1e-18
>seq69
Length=709337
Score = 224 bits (248), Expect = 2e-53
Identities = 572/858 (67%), Gaps = 13/858 (2%)
Strand=Plus/Minus
Query 110310 GGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATTGAACGT 110369
|||||||||||| | ||| | | ||||| | ||| ||||||| | | |||| |
Sbjct 434456 GGTTTCAAAACTTTAGAAAGATCATATTTGTTACGTATCAATGGTAAAGTAGCTGAAAGA 434397
Query 110370 CCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAAGCTGTT 110429
|| ||||| || || | | ||||| || ||||| |||||| ||||| | ||
Sbjct 434396 CCACAACATTTGATTATGAGAGTTGCTATCGGTATACATGGAAGGGATATCCCAAGAGTC 434337
Query 110430 ATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACCCTATT 110488
|||||| |||| | | || | ||| | | || |||| | ||||| ||||
Sbjct 434336 ATTGAAACTTATAACTTGATGTCGCAAAGATACTT-TACCCATGGTTCTCCTTGTTTATT 434278
Query 110489 TAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAACGATG 110547
||| || || ||| | |||| || | ||||| |||||| | | ||| || || |
Sbjct 434277 TAATGCTGGTACTCCAAAACCACAAATGTCATCTTG-TTTCTTGGTTGCAATGAAAGAAG 434219
Query 110548 ATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAAACTCT 110606
|||||||||||||||||||||| || ||||||| |||| | ||||| || | ||
Sbjct 434218 ATTCTATTGAAGGTATTTATGACACT-TTAAAGACTTGTGCTTTAATTTCAAAGAGTGCT 434160
Query 110607 GGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCG 110666
|| || |||||| | ||| ||||| | ||||| || | || || |||| || |
Sbjct 434159 GGTGGTATTGGTTTGCACATTCATAACATTCGTTCCACTGGTGCTTATATTGCTGGTACA 434100
Query 110667 AAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATAT 110726
|| ||| |||| | ||| || | || ||| | | || |||||| ||||||| |||
Sbjct 434099 AACGGTACTTCTAATGGTATTATCCCTATGGTTCGTGTTTTCAACAACACTGCCCGTTAT 434040
Query 110727 GTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCAT 110783
|| ||||||||||| |||||| || | |||||| | ||||| ||||| |||||
Sbjct 434039 GTTGATCAAGGTGGTAACAAGAGACCAGGTGCTTTTGCTTTGTATCTTGAACCATGGCAC 433980
Query 110784 TCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCA 110843
||||| ||||| ||| | || | | || || || || |||||| |||||
Sbjct 433979 AGTGATATCTTTGATTTCATTGAGATCAGAAAGAACCACGGTAAGGAAGAAATCAGAGCT 433920
Query 110844 CGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAAT 110903
| |||||||| || ||||||| ||||||| || ||||| | ||| || |||||
Sbjct 433919 AGAGATTTATTCCCAGCCTTGTGGATCCCAGATTTGTTTATGAAGAGAGTTGAACAAAAT 433860
Query 110904 GGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAA 110963
|| |||| | | | | ||| || |||| || | |||| ||||| |
Sbjct 433859 GGTGAGTGGACATTGTTCTCTCCAAATGAAGCTCCAGGATTGGCTGACACTTATGGTGAC 433800
Query 110964 GAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCGCAAACAAATTCC 111022
||||||| || | |||||||||||||||| ||||| | | | |||| | ||
Sbjct 433799 GAGTTTGTTGAGTTGTACGAAAAATATGAAAGGGAAGGTCGTGGTAGAAAAACCA--TCA 433742
Query 111023 A-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATA 111081
| |||||| | | |||| | ||| | ||| | ||| |||||||| || || | |
Sbjct 433741 AGGCTCAAAAGTTGTGGTACTCCATCTTGGAAGCTCAAACCGAAACTGGTACCCCATTCA 433682
Query 111082 TTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGT 111141
| |||||||| ||| | ||| ||| || || |||| ||||||||| | || || |
Sbjct 433681 TGTTGTATAAGGATGCTTGTAACACCAAGTCCAACCAAAAGAATTTAGGTATTATCAAAT 433622
Query 111142 CTAGTAATTTGTGCTGTG 111159
|| || ||||| ||||
Sbjct 433621 CTTCCAACTTGTGTTGTG 433604
Score = 129 bits (142), Expect = 1e-24
Identities = 481/735 (65%), Gaps = 33/735 (4%)
Strand=Plus/Plus
Query 131465 ATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGAT 131524
||||| ||||| ||| || | |||||||| | |||||| |||||| | ||||||
Sbjct 557934 ATGTACAAGAAGGCTGAGGCTTCATTCTGGACAGCTGAAGAAATCGATTTAGGTAAAGAT 557993
Query 131525 ATTGATGATTGG---GAAAAATTAACCTTGAATGAAAAAGATTTTGTTTCCAAAGT-TCT 131580
|| |||||||| |||||||||| | |||||| | || | | || ||| |||
Sbjct 557994 CTTCATGATTGGAGAGAAAAATTAAACGATAATGAAC--GTTTCTTTATCGGAAGAATCT 558051
Query 131581 TG-CATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAATTTCATTC 131639
|| | ||||| |||| | ||||| ||||||| |||||| | || || || |||
Sbjct 558052 TGGCTTTCTTTGCCGCATCCGATGGTATTGTTAATGAAAACTTGGTGGAAAACTT--TTC 558109
Query 131640 AA--GAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATC 131697
| ||| || | ||||| |||| | ||| |||||| ||| ||| | |||
Sbjct 558110 AGCTGAAGTTCAAATTCCAGAAGCTAAATCTTTCTACGGATTCCAAATTATGATGGAAAA 558169
Query 131698 TATTCATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATG---AAGATGA 131754
||||| || | || || ||||||||||| | | | || || |||| |
Sbjct 558170 CATTCACTCAGAAACTTACTCGTTATTGATTGAAACTTACATCAAGGATCCAAAAGAAGC 558229
Query 131755 TAAAAATAAATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATG 131814
| | | ||||| ||||| | | | |||| |||||||||||| || || ||
Sbjct 558230 TGACTTT---TTATTCAATGCTATTGAAACCATTCCGCAAATTAAAAAGAAGGCTGATTG 558286
Query 131815 GGCTATTAAATGGATTCAAGATGATTCCGCTA-ATTTTT--CTACAAGACTTGTAGCTTT 131871
||| || | |||||| |||||| |||| ||| || || ||| | || |||||
Sbjct 558287 GGCCATCAGATGGATCCAAGAT---TCCGAGGCATTGTTTGCTGAGAGATTGGTTGCTTT 558343
Query 131872 TGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTG---CTATCTTTTGGCTTAA 131928
||| |||||||||||| | |||||| ||| || | || |||| || ||| | ||
Sbjct 558344 CGCTGCTGTTGAAGGTATCT--TTTTCA-GTGGTTCATTTGCATCTATTTTCTGGTTGAA 558400
Query 131929 GAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGC 131988
||| | || |||||||| ||| | | || ||||| |||| || | | || ||||
Sbjct 558401 GAAAAGAGGTTTGATGCCAGGATTAACTTTCTCCAACGAATTAATTTGTCGTGACGAAGG 558460
Query 131989 ATTGCATACTGAATTTGCTATATTAATCTATAGAAAATTTGC-TGATAAACTTGATGAAA 132047
|| || ||||| || || || || || | | |||| | ||| || ||| ||
Sbjct 558461 TTTACACACTGATTTCGC-ATGTTTATTATTTGCTCATTTACAACATAGACCAGATCCAA 558519
Query 132048 ATAATATTAAACAACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAG 132107
| | || || | |||| | ||||| ||||| || || || || || |||| || |
Sbjct 558520 AGATCGTTGAAAGAATTATTACTGAAGCTGTTGAAATTGAAAAAGAATTCTTTACTGATG 558579
Query 132108 CTTTGCCTTGCAATTTGATTGGG-ATGAATGCTGACTCTATGAAGGAGTACATTGAATTC 132166
|||| || | | || |||||| |||||| | | | ||| | || | |||||
Sbjct 558580 CTTTACC-AGTTAGTTTATTGGGTATGAATTGTAAATTAATGTGTCAATATGTCGAATTT 558638
Query 132167 GTTGCTGATCGTTTA 132181
||||||||| | |||
Sbjct 558639 GTTGCTGATAGATTA 558653
>seq35
Length=214301
Score = 161 bits (178), Expect = 2e-34
Identities = 436/654 (67%), Gaps = 25/654 (4%)
Strand=Plus/Plus
Query 110520 TCTTGCTTTCTT-CTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAA 110578
||||| |||||| |||| ||| || |||||||| ||||| || || ||| | | ||| |
Sbjct 164566 TCTTG-TTTCTTGCTAGCAATGAAGGATGATTCCATTGATGGAATCTATCAAACACTTCA 164624
Query 110579 AGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCG 110638
||| | || | ||||| ||| ||||| || ||||| || || |||| |||| |
Sbjct 164625 CGAAGCAGCCTTGATTTCCAAAGCTTCTGGTGGGATTGGGATCCATATTCACAATATCAG 164684
Query 110639 CTCAAAAGGA--GCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATG 110696
| ||||| ||| || | | | | | ||| | | | ||| | ||||| |||
Sbjct 164685 AGCGCAAGGATCGCACAT-TAGTAGTACTAATGGGAGAT-CTGGTGGGGTAGTTCCCATG 164742
Query 110697 TTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGC 110753
|| | || |||||| |||| ||| |||||| | ||||| || || ||| ||
Sbjct 164743 TTGCGCGTTTTCAACAACACCGCACGATATGTTGACCAAGGCGGAGGAAAAAGACCAGGA 164802
Query 110754 TCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGT 110813
||||||| |||||| | |||||||||||| | || || ||||| | || | | |
Sbjct 164803 GCATTTGCAATCTATATGGAACCTTGGCATGCTGACATCTTTGACATTTTGAATATGAGG 164862
Query 110814 AAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCA 110873
|||||||| || |||||||| || | | ||||| || |||| | |||||| ||
Sbjct 164863 AAAAATCACGGCAATGAAGAACTTCGAACTAGAGATTTGTTCTATGGGTTATGGATTCCA 164922
Query 110874 GATTTATTCATGAAACGTGTTCA---AGAAAATGGCATGTGGTCTCTTATGTGTCCTCAT 110930
||||| |||||| || | || | || | ||| || ||||| | | | ||| ||
Sbjct 164923 GATTTGTTCATGCAAAGAGTGAAATCAGGAGATG--AT-TGGTCGTTATTCTCTCCCGAT 164979
Query 110931 CGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATAT 110990
| ||||| | |||||| ||||| | ||||| | | | ||||| ||||||
Sbjct 164980 ATCGCACCTGGGTTGAGTGATGTTTATGGCAGCGAGTTCGTTAAAATGTACGAGAAATAT 165039
Query 110991 GAAA---AAGAA--GGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAA 111045
|||| ||| | ||| | | || || ||| ||| ||| |||||||||| ||
Sbjct 165040 GAAACTCAAGGATTGGC-ATCTGCGACAATAAA----AGCCCAAAAACTTTGGTTAGCAA 165094
Query 111046 TCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATC 111105
| | || |||||| ||| || ||| ||| || || ||||||||||| |||||
Sbjct 165095 TTTTGGAGTCACAAACTGAGACAGGAGGTCCGTACATGTTGTATAAAGACGCCTGTAATC 165154
Query 111106 GCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159
||| |||| || ||| |||||||||| ||||| || || |||||||
Sbjct 165155 AAAAAACTAACCAGTCCAATCTAGGAACAATCAAGTCCTCAAACTTATGCTGTG 165208
>seq7
Length=328414
Score = 125 bits (138), Expect = 2e-23
Identities = 399/618 (65%), Gaps = 47/618 (8%)
Strand=Plus/Minus
Query 167248 CACCAGCATTATCGAATTCATTCGCATAATTTGGTGCTGAAAATACAGTAACTAATTTAC 167307
||||||||||||| |||||| ||||||||| |||||||||| |||||| |||| ||
Sbjct 267537 CACCAGCATTATCAAATTCACCACAATAATTTGGAGCTGAAAATAAAGTAACCAATTGAC 267478
Query 167308 GATTGAAAAATAATTCATAACCATCTTCAACAACTTCATGGGCACGTATTACAAGTTCAA 167367
| ||| || ||||||||||||||||||||||||| ||| ||||| |||| || ||
Sbjct 267477 GTTTGCTGAAAAATTCATAACCATCTTCAACAACTTGATGAGCACG----ACAAATTAAA 267422
Query 167368 CTCCTAt--ttttttAAGAAAATTAGTTAAAGCACGTAA--TCCAAATTTATAACTACAA 167423
| ||| | |||| |||| | ||| || | | ||||| || || | |
Sbjct 267421 TCCATATCATGTTTTTGCAAAAAACGCGAAACAACATCAGGACCAAAAGTAAAAGAAACA 267362
Query 167424 CCTCTTTCAGATTCAGAATAATAATCAATATCATGCGATGGATCCGCCCAAAGAAGATCG 167483
|| | ||| |||||| || | |||||| | ||||| | ||| | | |||
Sbjct 267361 CCACGATCATTTTCAGACCAACCAGTAATATCTTTATCAGGATCTGACCATAACAAATCA 267302
Query 167484 CATACCAACCCCTTATCAGGGATATCAATAGGTTTTTTAATCCTATTGATATCTTCTAAT 167543
|| | ||||| |||||| |||||| | || ||| ||| | || | ||| | |
Sbjct 267301 CACAATAACCCAACATCAGGAATATCAGTTGGACGCATAACCCTCCTAATTTGTTCCATT 267242
Query 167544 TTATTAATATCTTCAGTG--ATTCCACCATGAACACAAAAAGCCAATGGATTATCAATTG 167601
||| | ||| | ||| | ||||||||| |||| | |||
Sbjct 267241 GAATTCAAATC--CGGTGACAATCCACCATG-------------CATGG----TGAATAT 267201
Query 167602 TTATTC--CAATGGTTGCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCA 167659
|| ||| |||| | |||||||||| | | | |||| ||| | ||| |||||||
Sbjct 267200 TTTTTCATCAATAATAGCAGCAATAGGTAAACAATTAAAACAATCAGTAAAAGTTTTCCA 267141
Query 167660 GATTTTTATCGAACCACGTCGTTTGCATTCATCGTAAAAACCATAGTCTCTTGAGATATC 167719
| ||| || | | |||||| |||||||| ||||| ||||| | |||
Sbjct 267140 AAGTTTAATATTATATCTTCGTTTACATTCATCATAAAACCCATAAATACGGTTGATTGA 267081
Query 167720 AGCACATTCGTGATTTCCTCT-----TAATAAAATTAT---GTTATTTNNNNNNNNNNNN 167771
||||||||| ||||| ||||| ||| |||||| | | |||||
Sbjct 267080 AGCACATTCATGATTACCTCTAAGGATAAAAAAATTTTCCGGATATTT--------GATC 267029
Query 167772 NTGTAGCAAAATAATAACAAAATTGTTTCTAATGATTTAACACCTCTATCAACATAATCA 167831
|||| ||||| | |||| || || || || |||||||||||||||||||
Sbjct 267028 TTGTAAGCTAATAAAAGACAAATGGTCTCCAAACTTTGTTTACCTCTATCAACATAATCA 266969
Query 167832 CCTAAAAATATATATTTA 167849
|| | ||||| ||| |||
Sbjct 266968 CCAAGAAATAAATAGTTA 266951
>seq27
Length=151770
Score = 109 bits (120), Expect = 1e-18
Identities = 134/181 (74%), Gaps = 4/181 (2%)
Strand=Plus/Minus
Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368
||||||| ||| | ||| ||| | ||||| | ||||| || ||||||||||||||
Sbjct 14472 CATTTGATGGACGACGATCCAGTTTTATTCAACCGTCAACCTTCGTTGCATAAAATGTCT 14413
Query 305369 ATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAA--TGTAAGTG 305426
|||||||| |||| ||| || || | || | ||||| |||| || ||| |||
Sbjct 14412 ATGATGGCGCATAGAGTTAAGGTTATGCCTTATTCTACATTCAGATTGAACTTGTCAGT- 14354
Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486
| ||||||||||||| ||||| ||||| || || |||||| |||||||||| ||||
Sbjct 14353 -TACCTCGCCTTATAATGCAGATTTCGATGGTGACGAGATGAATTTGCATGTACCACAAT 14295
Query 305487 C 305487
|
Sbjct 14294 C 14294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186810671154540
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