Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq54 120 2e-22 seq41 118 7e-22 >seq54 Length=356724 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || ||||| || | |||| || ||||| |||||||| |||| Sbjct 21889 CACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGG 21830 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | | || ||||||||||| || ||||| ||||| | || |||||| | | Sbjct 21829 ATAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAG 21770 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| ||||| || || | || ||||| ||| | |||||| ||| || Sbjct 21769 GGATTCCTTCCTTGTCTTGGATCTT-GGATTTAACATTGTCAATGGTGTCAGATGACTCA 21711 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| |||||||| || | ||||| || || || ||||| Sbjct 21710 ACTTCCAAAGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCAT 21661 >seq41 Length=287713 Score = 118 bits (130), Expect = 7e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | |||||||| || | ||| |||||||| |||||||| || || Sbjct 13266 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 13207 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| || |||||||| || ||||| ||||| | || || ||| | || Sbjct 13206 TAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 13147 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||||||| || || | | |||| ||| | |||||| ||||| | Sbjct 13146 AATACCTTCTTTGTCCTGGATCTT-AGACTTGACATTGTCAATAGTGTCGGAAGATTCAA 13088 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 | || | ||||| || ||||| ||||| ||||| || || || ||||| || Sbjct 13087 CTTCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATTGT 13036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703439148800