Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq54 120 2e-22
seq41 118 7e-22
>seq54
Length=356724
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || ||||| || | |||| || ||||| |||||||| ||||
Sbjct 21889 CACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGG 21830
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | | || ||||||||||| || ||||| ||||| | || |||||| | |
Sbjct 21829 ATAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAG 21770
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | ||||| ||||| || || | || ||||| ||| | |||||| ||| ||
Sbjct 21769 GGATTCCTTCCTTGTCTTGGATCTT-GGATTTAACATTGTCAATGGTGTCAGATGACTCA 21711
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | ||||| |||||||| || | ||||| || || || |||||
Sbjct 21710 ACTTCCAAAGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCAT 21661
>seq41
Length=287713
Score = 118 bits (130), Expect = 7e-22
Identities = 167/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || | ||| |||||||| |||||||| || ||
Sbjct 13266 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 13207
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | |||| || |||||||| || ||||| ||||| | || || ||| | ||
Sbjct 13206 TAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 13147
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||||||| || || | | |||| ||| | |||||| ||||| |
Sbjct 13146 AATACCTTCTTTGTCCTGGATCTT-AGACTTGACATTGTCAATAGTGTCGGAAGATTCAA 13088
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
| || | ||||| || ||||| ||||| ||||| || || || ||||| ||
Sbjct 13087 CTTCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATTGT 13036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703439148800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |