Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq41 105 6e-18
seq54 87.8 2e-12
>seq41
Length=287713
Score = 105 bits (116), Expect = 6e-18
Identities = 167/238 (70%), Gaps = 1/238 (0%)
Strand=Plus/Plus
Query 25165 ATTAAACAACA-TGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAG 25223
|||||| ||| ||||| | || || ||||| |||||||| || | ||||| | ||||
Sbjct 13028 ATTAAATCACAATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGGAAG 13087
Query 25224 TCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATAC 25283
| ||| | ||| ||||| || | || || || || || ||||| ||||| |
Sbjct 13088 TTGAATCTTCCGACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTATTC 13147
Query 25284 CGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCA 25343
| || || || |||||| | || | | || |||||| | ||||| | ||||| | |
Sbjct 13148 CACCAGACCAACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTAT 13207
Query 25344 GCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| ||||| || ||||||||||| || | || || ||||| ||||||||||| ||
Sbjct 13208 CTGACTACAACATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 13265
>seq54
Length=356724
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| |||||| | || || ||||| | || || ||| | ||||| | ||||| || |
Sbjct 21657 CAAAATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGA-GT 21715
Query 25231 CAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289
|| | || || || || | || ||| || || || || || || || || || |
Sbjct 21716 CATCTGACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAG 21775
Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349
|||| |||||| | || | | || |||||| | ||||||| |||| | ||| |
Sbjct 21776 ATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACT 21835
Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|||| |||||||| |||||||| | || || || || ||||||||||| ||
Sbjct 21836 ACAACATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 21887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445093621084800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |