Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq41 105 6e-18 seq54 87.8 2e-12 >seq41 Length=287713 Score = 105 bits (116), Expect = 6e-18 Identities = 167/238 (70%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 25165 ATTAAACAACA-TGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAG 25223 |||||| ||| ||||| | || || ||||| |||||||| || | ||||| | |||| Sbjct 13028 ATTAAATCACAATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGGAAG 13087 Query 25224 TCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATAC 25283 | ||| | ||| ||||| || | || || || || || ||||| ||||| | Sbjct 13088 TTGAATCTTCCGACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTATTC 13147 Query 25284 CGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCA 25343 | || || || |||||| | || | | || |||||| | ||||| | ||||| | | Sbjct 13148 CACCAGACCAACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTAT 13207 Query 25344 GCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||| || ||||||||||| || | || || ||||| ||||||||||| || Sbjct 13208 CTGACTACAACATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 13265 >seq54 Length=356724 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| |||||| | || || ||||| | || || ||| | ||||| | ||||| || | Sbjct 21657 CAAAATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGA-GT 21715 Query 25231 CAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289 || | || || || || | || ||| || || || || || || || || || | Sbjct 21716 CATCTGACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAG 21775 Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349 |||| |||||| | || | | || |||||| | ||||||| |||| | ||| | Sbjct 21776 ATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACT 21835 Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||| |||||||| |||||||| | || || || || ||||||||||| || Sbjct 21836 ACAACATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 21887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093621084800