Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq41 105 6e-18
seq54 104 2e-17
>seq41
Length=287713
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||||||||| || || ||| || ||||| |||||||| || |
Sbjct 13265 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAT 13206
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| |||| |||| || | || ||||| ||||| ||||| | || ||||| | |||
Sbjct 13205 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 13146
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | || |||||| |||||| ||| | | | | | |||||| ||||| ||
Sbjct 13145 ATACCTTCTTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACT 13086
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|||| ||||| || ||||| || |||||||| || || || |||||| ||
Sbjct 13085 TCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATTGTG 13035
>seq54
Length=356724
Score = 104 bits (114), Expect = 2e-17
Identities = 171/245 (70%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 35499 TCTCTTTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555
|||||| || ||||||| | || ||||| ||||| || || || ||||||||||
Sbjct 21900 TCTCTTC-TTACCACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAA 21842
Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615
||||||| |||| ||||||| | || |||| || ||||| ||||| ||||| | |
Sbjct 21841 TGTTGTAGTCGGATAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTT 21782
Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675
| || || | ||| | | |||||||| |||||| || | | | | | ||||
Sbjct 21781 GTTGATCTGGAGGGATTCCTTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATGGTGT 21722
Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
| || || || |||| ||||| ||||||||||| | ||||| || || || ||||
Sbjct 21721 CAGATGACTCAACTTCCAAAGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCA 21662
Query 35736 TTCTG 35740
|| ||
Sbjct 21661 TTTTG 21657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792811111200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |