Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq41 105 6e-18 seq54 104 2e-17 >seq41 Length=287713 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||||||||| || || ||| || ||||| |||||||| || | Sbjct 13265 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAT 13206 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| || | || ||||| ||||| ||||| | || ||||| | ||| Sbjct 13205 AGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 13146 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || |||||| |||||| ||| | | | | | |||||| ||||| || Sbjct 13145 ATACCTTCTTTGTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACT 13086 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 |||| ||||| || ||||| || |||||||| || || || |||||| || Sbjct 13085 TCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATTGTG 13035 >seq54 Length=356724 Score = 104 bits (114), Expect = 2e-17 Identities = 171/245 (70%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 35499 TCTCTTTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555 |||||| || ||||||| | || ||||| ||||| || || || |||||||||| Sbjct 21900 TCTCTTC-TTACCACCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAA 21842 Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615 ||||||| |||| ||||||| | || |||| || ||||| ||||| ||||| | | Sbjct 21841 TGTTGTAGTCGGATAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTT 21782 Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675 | || || | ||| | | |||||||| |||||| || | | | | | |||| Sbjct 21781 GTTGATCTGGAGGGATTCCTTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATGGTGT 21722 Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 | || || || |||| ||||| ||||||||||| | ||||| || || || |||| Sbjct 21721 CAGATGACTCAACTTCCAAAGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCA 21662 Query 35736 TTCTG 35740 || || Sbjct 21661 TTTTG 21657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792811111200