Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq69 389 5e-103 >seq69 Length=709337 Score = 389 bits (430), Expect = 5e-103 Identities = 1203/1842 (65%), Gaps = 36/1842 (2%) Strand=Plus/Plus Query 68365 TTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCG 68424 ||||| | || || ||||| | | || |||| || ||| | | |||||||||||| Sbjct 432625 TTATCAATAGTGAATTGAATAGCAGCAGAGGCGGCTTGTGTTCTCAAATAGTACATACCA 432684 Query 68425 GTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGA 68484 || || | ||| ||||||| || || ||||||||||| | ||| |||| Sbjct 432685 GTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGG 432744 Query 68485 TCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCC 68544 || |||||||| || | ||||| |||||| ||||| ||| | ||||| | ||| Sbjct 432745 TCCTTGATATGAATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCC 432804 Query 68545 ATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCA 68604 || | |||||| |||||||| |||||||| | ||||| | | ||| || ||| Sbjct 432805 ATATCGATAATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCA 432864 Query 68605 TCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATC 68661 || || | | | | | ||| ||||| ||| | || ||||| || |||| || Sbjct 432865 TCGGGGATGTTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATA 432924 Query 68662 TCATCATTCCACAATTTTCTC-TCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTG 68720 |||| ||||| ||| | || ||| | | | | | |||||||| ||||| Sbjct 432925 GCATCGTTCCA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTG 432983 Query 68721 AAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 68780 ||||| |||| |||||||| | | ||| || || || |||||||| | | |||| Sbjct 432984 GAATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTC 433043 Query 68781 ATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATT 68840 ||| || |||| |||||| | || || || |||||||| || |||||||| ||| || Sbjct 433044 ATTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTT 433103 Query 68841 TCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGG 68900 ||| | ||||||| | | ||| | ||| | | | ||||||||| | || | || Sbjct 433104 TCTCATACCATGTTTGGCAAGTTTTTGTTTCAATTCATCCCAATCCCATAATTCTGTAGG 433163 Query 68901 TACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGT 68960 | ||| | || ||||||| | || | ||| |||||| | || || Sbjct 433164 CTTTCTGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGT 433223 Query 68961 TTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAAT 69020 ||||||||| ||||| | || || | |||| | || || | ||| ||| ||| || Sbjct 433224 TTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGAT 433283 Query 69021 TGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATG-GATAATGTA 69079 ||||||||||| | | || | ||| |||||| | ||||||| ||| | || Sbjct 433284 AGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCT-TA 433342 Query 69080 AAAGAATAAATGCATCTGCCAATCCCTGAAC-CCCAATACCGATAGGTCTATGTCTCTTA 69138 ||| || || ||||| ||||| || || || |||||| | || ||||| |||||| | Sbjct 433343 AAACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCA-ATTGGTCTGTGTCTCATG 433401 Query 69139 TTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTT 69198 || || | |||||||| || | || |||||||| | ||||| | | | || | || Sbjct 433402 TTAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTA 433461 Query 69199 CGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT----CAAATCGT-----CCA 69249 || || ||||| || || | | ||| ||| | | || ||| ||| Sbjct 433462 CGAGTAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCA 433521 Query 69250 TCTAT---AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTA 69306 ||| || |||| | | || | ||||| | ||||| || || || || | Sbjct 433522 TCTTGTTCAATAAACGAAGGTAAAGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCT 433581 Query 69307 GAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTT 69366 | | || |||| | || || ||| | || | |||||||| | || | ||| Sbjct 433582 GGAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTC 433641 Query 69367 TGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCA 69426 | || || ||| ||||||| || ||||| || | || || || ||||||||||| Sbjct 433642 TTTTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCG 433701 Query 69427 ATCTGAGATTCGATAATAGATTTCCAAACGACCCT--AGCATTTATTACGGTCTTGTA-- 69482 | |||| ||| | || || | ||| | || | ||| || || | | || || Sbjct 433702 GTTTGAGCTTCCAAGATGGAGTACCACA--ACTTTTGAGCCTTGATG--GTTTTTCTACC 433757 Query 69483 ACG--CTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCA 69540 ||| |||| |||| |||||| | || | | | || || || || || ||| Sbjct 433758 ACGACCTTCCCTTT--CATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCA 433815 Query 69541 TCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGT 69600 ||||||| ||| |||||||||| | | ||||| |||| || ||| | | ||||| Sbjct 433816 GCCAATCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTC 433875 Query 69601 TTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660 |||||||| | ||| || ||||| | ||| || | |||||| | ||| ||||||| Sbjct 433876 TTCATAAACAAATCTGGGATCCACAAGGCTGGGAATAAATCTCTAGCTCTGATTTCTTCC 433935 Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 || || || ||| | | || | || || | |||||| ||||||||||| ||| Sbjct 433936 TTACCGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGA 433995 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 || | || | | || |||| || || || || ||||| | || | ||||||||| Sbjct 433996 TACAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTG 434055 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 || | || | | ||| || |||||||||||||| |||| ||||| |||| ||||||| Sbjct 434056 TTGAAAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAA 434115 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900 || | | ||||| ||| ||| | ||| || || || || | || || ||| Sbjct 434116 GCACCAGTGGAACGAATGTTATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATT 434175 Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA-TGTTAAG 69959 | ||||||| || || |||||||| ||||| || || ||| ||| ||| || | Sbjct 434176 AAAGCACAAGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACC 434235 Query 69960 AAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGC 70019 |||||| || | |||||||| | | | ||| || ||||||||||| |||||| | Sbjct 434236 AAGAAACAAGAT-GACATTTGTGGTTTTGGAGTACCAGCATTAAATAAACAAGGAGAACC 434294 Query 70020 GTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCA 70079 || || || || ||| || | || || || |||||||| || | ||||||| Sbjct 434295 ATGGGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCCCT 434354 Query 70080 CTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATT 70139 ||| || || || || || | ||| | || ||| || |||| ||| | |||| Sbjct 434355 TCCATGTATACCGATAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAGCTACTTTACC 434414 Query 70140 ATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTT-AAACC 70180 ||| || |||| |||||| |||| | |||||| ||||| Sbjct 434415 ATTGATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACC 434456 Score = 293 bits (324), Expect = 3e-74 Identities = 613/903 (68%), Gaps = 19/903 (2%) Strand=Plus/Minus Query 39305 TCTTGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTT 39364 ||||| | |||||| || |||||| || ||| ||| | || || || ||||| || Sbjct 558792 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 558734 Query 39365 TTGCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAttttttt 39424 || || |||| || || |||||||| |||||||| |||||||| |||| || |||| Sbjct 558733 TTCCCAGCCAAGGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTT 558674 Query 39425 ttAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATT 39484 ||| || || | | |||||||| ||||||||||| | ||| ||| | | Sbjct 558673 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAAT 558614 Query 39485 TCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATG 39544 | ||||||||| || | | ||||||||| ||| || || | || |||||||| || Sbjct 558613 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 558554 Query 39545 TCTACGGCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGT 39604 || || || || || || || | || | || | ||| ||| |||||| Sbjct 558553 TCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGA 558494 Query 39605 TTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTA 39664 ||| | ||| || ||||| ||| |||| || || || | || |||||||||||| Sbjct 558493 GCAAATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 558434 Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724 || || || | ||| ||||| | ||| | || || | ||| || || | ||||| || Sbjct 558433 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 558374 Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTA 39784 ||| || ||||| ||||| || || || || ||||| | |||||| | | || Sbjct 558373 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCC 558314 Query 39785 TC---ATTATGTATCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGT 39840 || || || ||||| || || ||||||||||| ||||| || | || || || Sbjct 558313 TCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGT 558255 Query 39841 TTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAA 39900 ||| |||||||| || | | | | ||| | ||| || | || || || || || Sbjct 558254 TTCAATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCAA 558195 Query 39901 CAGACTA-TACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATC 39959 | || | || ||||||| || |||||||| ||| || || |||||||| ||| || Sbjct 558194 TA-ACGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATT 558136 Query 39960 TTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTC 40019 | ||||| | |||||| || || | |||| ||||| |||| |||||||| || || | Sbjct 558135 TAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATAC 558076 Query 40020 CATCACTAGCGGCAAAAAATGCCAATACATGTT----TAATAAAATATTTTTCATCGGGT 40075 |||| |||||||| || ||||| | | || ||| ||| || | |||| Sbjct 558075 CATCGGATGCGGCAAAGAAAGCCAAGA-TTCTTCCGATAAAGAAACGTTCATTATCG--- 558020 Query 40076 GTCAATTTAT---TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 40132 | ||||| | |||| |||| | |||||| || ||| | ||||||||||||||| Sbjct 558019 TTTAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAG 557960 Query 40133 AACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATA 40192 || || ||||| ||||| |||||||| | ||| || ||| | ||| |||||||| || Sbjct 557959 AATGAAGCCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATG 557900 Query 40193 ACA 40195 ||| Sbjct 557899 ACA 557897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907597909600