Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq69 226 2e-54
>seq69
Length=709337
Score = 226 bits (250), Expect = 2e-54
Identities = 593/886 (67%), Gaps = 29/886 (3%)
Strand=Plus/Plus
Query 43702 TGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTC 43761
|||| |||||||||| ||| ||||| || |||||||||||||| || || |||| ||
Sbjct 557897 TGTCATGTTTCCAATCAGATACCATGAAATCTGGCAAATGTACAAGAAGGCTGAGGCTTC 557956
Query 43762 ATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGCATTA 43819
||| |||||||| |||||| | ||||| |||||| ||| || |||||| | | |
Sbjct 557957 ATTCTGGACAGCTGAAGAAATCGATTTAGGTAAAGATCTT--CATGATTGGAGAGAAAAA 558014
Query 43820 --AAACCACAAGAAAAACATTT-TATATCTTTGG--TTTTGGCGTTTTTTGCTGCGAGCG 43874
|||| | || || | ||| | |||| | | ||||| || ||||| || ||
Sbjct 558015 TTAAACGATAATGAA--CGTTTCTTTATCGGAAGAATCTTGGCTTTCTTTGCCGCATCCG 558072
Query 43875 ACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAG 43934
| || || || |||||||| ||||| ||| | ||||||||| | |||||||
Sbjct 558073 ATGGTATTGTTAATGAAAACTTGGTGGAAAACTTTTCAGCTGAAGTTCAAATTCCAGAAG 558132
Query 43935 CACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTC 43994
| || ||| || || || |||||| || ||||| ||||| || |||| |||
Sbjct 558133 CTAAATCTTTCTACGGATTCCAAATTATGATGGAAAACATTCACTCAGAAACTTACTCGT 558192
Query 43995 TTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGAT 44052
| |||| || || |||||||| ||| || |||||| | || || ||||| ||
Sbjct 558193 TATTGATTGAAACTTACATCAAGGATC--CAAAAGAAGCTGACTTTTTATTCAATGCTAT 558250
Query 44053 AGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTC 44109
||||| | || |||||| | || || || |||||| | | |||||| | ||||
Sbjct 558251 TGAAACCATTCCGCAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATCCAAGATTC 558310
Query 44110 AAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTC 44169
| | | |||| || || | || || || || | ||| ||||| || || ||||
Sbjct 558311 CGAGGCATTGTTTGCTGAGAGATTGGTTGCTTTCGCTGCTGTTGAAGGTATCTT--TTTC 558368
Query 44170 AG--GATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACG 44227
|| | || ||||| | || || ||||| |||||| ||||||||||||| || || ||
Sbjct 558369 AGTGGTTCATTTGCATCTATTTTCTGGTTGAAGAAAAGAGGTTTGATGCCAGGATTAACT 558428
Query 44228 TTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTA 44287
|| || || || ||||| ||||||| ||||| ||||| ||||| || || || |||
Sbjct 558429 TTCTCCAACGAATTAATTTGTCGTGACGAAGGTTTACACACTGATTTCGCATGTTTATTA 558488
Query 44288 CTTGGATATCTAGGAGA-CGATAAGCCTTCATGTAAGA-CAATTACAGATATTGTTGTAG 44345
||| || || | | || || | || |||| | | | ||| ||| || |
Sbjct 558489 TTTGCTCATTTACAACATAGACCAG-ATCCA---AAGATCGTTGAAAGA-ATTATTACTG 558543
Query 44346 AGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAA 44405
| || || | || ||| ||||||| | || || ||||| || | |||| | || |
Sbjct 558544 AAGCTGTTGAAATTGAAAAAGAATTCTTTACTGATGCTTTACCAGTTAGTTTATTGGGTA 558603
Query 44406 TGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAAC 44465
||||| || ||| |||||| | |||| |||| ||| | ||| | | |
Sbjct 558604 TGAATTGTAAATTAATGTGTCAATATGTCGAATTTGTTGCTGATAGATTATTGGTTGCTT 558663
Query 44466 TGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGT 44525
||||| | ||| || | ||| || || ||||||||||||||||| ||||| |
Sbjct 558664 TGGGTAATAAAAAAGTTTACAATGTCACTAATCCATTTGATTTTATGGAAAACATTTCCT 558723
Query 44526 TGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571
||| || || || || || |||||||| | ||| || |||||
Sbjct 558724 TGGCTGGGAAGACCAATTTCTTTGAAAAGAGAGTTTCTGATTATCA 558769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455321840700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |