Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq69 226 2e-54 >seq69 Length=709337 Score = 226 bits (250), Expect = 2e-54 Identities = 593/886 (67%), Gaps = 29/886 (3%) Strand=Plus/Plus Query 43702 TGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTC 43761 |||| |||||||||| ||| ||||| || |||||||||||||| || || |||| || Sbjct 557897 TGTCATGTTTCCAATCAGATACCATGAAATCTGGCAAATGTACAAGAAGGCTGAGGCTTC 557956 Query 43762 ATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGCATTA 43819 ||| |||||||| |||||| | ||||| |||||| ||| || |||||| | | | Sbjct 557957 ATTCTGGACAGCTGAAGAAATCGATTTAGGTAAAGATCTT--CATGATTGGAGAGAAAAA 558014 Query 43820 --AAACCACAAGAAAAACATTT-TATATCTTTGG--TTTTGGCGTTTTTTGCTGCGAGCG 43874 |||| | || || | ||| | |||| | | ||||| || ||||| || || Sbjct 558015 TTAAACGATAATGAA--CGTTTCTTTATCGGAAGAATCTTGGCTTTCTTTGCCGCATCCG 558072 Query 43875 ACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAG 43934 | || || || |||||||| ||||| ||| | ||||||||| | ||||||| Sbjct 558073 ATGGTATTGTTAATGAAAACTTGGTGGAAAACTTTTCAGCTGAAGTTCAAATTCCAGAAG 558132 Query 43935 CACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTC 43994 | || ||| || || || |||||| || ||||| ||||| || |||| ||| Sbjct 558133 CTAAATCTTTCTACGGATTCCAAATTATGATGGAAAACATTCACTCAGAAACTTACTCGT 558192 Query 43995 TTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGAT 44052 | |||| || || |||||||| ||| || |||||| | || || ||||| || Sbjct 558193 TATTGATTGAAACTTACATCAAGGATC--CAAAAGAAGCTGACTTTTTATTCAATGCTAT 558250 Query 44053 AGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTC 44109 ||||| | || |||||| | || || || |||||| | | |||||| | |||| Sbjct 558251 TGAAACCATTCCGCAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATCCAAGATTC 558310 Query 44110 AAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTC 44169 | | | |||| || || | || || || || | ||| ||||| || || |||| Sbjct 558311 CGAGGCATTGTTTGCTGAGAGATTGGTTGCTTTCGCTGCTGTTGAAGGTATCTT--TTTC 558368 Query 44170 AG--GATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACG 44227 || | || ||||| | || || ||||| |||||| ||||||||||||| || || || Sbjct 558369 AGTGGTTCATTTGCATCTATTTTCTGGTTGAAGAAAAGAGGTTTGATGCCAGGATTAACT 558428 Query 44228 TTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTA 44287 || || || || ||||| ||||||| ||||| ||||| ||||| || || || ||| Sbjct 558429 TTCTCCAACGAATTAATTTGTCGTGACGAAGGTTTACACACTGATTTCGCATGTTTATTA 558488 Query 44288 CTTGGATATCTAGGAGA-CGATAAGCCTTCATGTAAGA-CAATTACAGATATTGTTGTAG 44345 ||| || || | | || || | || |||| | | | ||| ||| || | Sbjct 558489 TTTGCTCATTTACAACATAGACCAG-ATCCA---AAGATCGTTGAAAGA-ATTATTACTG 558543 Query 44346 AGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAA 44405 | || || | || ||| ||||||| | || || ||||| || | |||| | || | Sbjct 558544 AAGCTGTTGAAATTGAAAAAGAATTCTTTACTGATGCTTTACCAGTTAGTTTATTGGGTA 558603 Query 44406 TGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAAC 44465 ||||| || ||| |||||| | |||| |||| ||| | ||| | | | Sbjct 558604 TGAATTGTAAATTAATGTGTCAATATGTCGAATTTGTTGCTGATAGATTATTGGTTGCTT 558663 Query 44466 TGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGT 44525 ||||| | ||| || | ||| || || ||||||||||||||||| ||||| | Sbjct 558664 TGGGTAATAAAAAAGTTTACAATGTCACTAATCCATTTGATTTTATGGAAAACATTTCCT 558723 Query 44526 TGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571 ||| || || || || || |||||||| | ||| || ||||| Sbjct 558724 TGGCTGGGAAGACCAATTTCTTTGAAAAGAGAGTTTCTGATTATCA 558769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455321840700