Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq35 111 1e-19
seq69 104 2e-17
>seq35
Length=214301
Score = 111 bits (122), Expect = 1e-19
Identities = 201/291 (69%), Gaps = 5/291 (2%)
Strand=Plus/Minus
Query 131648 ACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTC 131707
|||| | ||| |||||||| || | ||||||| | || |||| |||||||| |
Sbjct 164942 ACTCTTTGCATGAACAAATCTGGAATCCATAACCCATAGAACAAATCTCTAGTTCGAAGT 164883
Query 131708 TCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGT 131767
||||| | || | |||| ||| ||| |||| ||| || ||||| |||||||| |||
Sbjct 164882 TCTTCATTGCCGTGATTTTTCCTCATATTCAAAATGTCAAAGATGTCAGCATGCCAAGGT 164823
Query 131768 TCCAAATACACTGCCATTGCGCCTTTGCGCTTACC---GCCTTGATTAACATGACGAACC 131824
|||| ||| | ||| | ||| ||| | || || |||||| | ||||| || |
Sbjct 164822 TCCATATAGATTGCAAATGCTCCTGGTCTTTTTCCTCCGCCTTGGTCAACATATCGTGCG 164763
Query 131825 ATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTA 131884
|||||||| | |||||||||||||| | | || | | ||||| || || ||
Sbjct 164762 GTGTTGTTGAAAACGCGCAACATGGGAACTACCCCACCAGATCTCCCATTAGTACTACTA 164703
Query 131885 ATGTAGCTGCCATTG-GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC 131934
|||| || | ||| |||||||| ||||||| | || ||||| || ||
Sbjct 164702 ATGT-GCGATCCTTGCGCTCTGATATTGTGAATATGGATCCCAATCCCACC 164653
>seq69
Length=709337
Score = 104 bits (114), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 130753 aTTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGG 130812
||||| ||||| || |||||||||| || | ||| ||| ||||| ||| | ||
Sbjct 432972 ATTAACAATTTGGAATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGG 433031
Query 130813 TTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCAC 130872
|||||| |||| ||||| || || ||||||| ||| | ||||| ||||| |||||
Sbjct 433032 TTCAAAACATTCATTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCAC 433091
Query 130873 TAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCA 130932
|| | ||| || | | ||| || | | | |||| | ||||||||||||||||||||
Sbjct 433092 CAACAAAGAGTTTCTCATACCATGTTTGGCAAGTTTTTGTTTCAATTCATCCCAATCCCA 433151
Query 130933 TAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTA 130973
|| ||||| || ||| ||||| ||| ||||||
Sbjct 433152 TAATTCTGTAGGCTT---TCTGTCCCACAAGTCATATTGTA 433189
Score = 82.4 bits (90), Expect = 6e-11
Identities = 239/363 (66%), Gaps = 9/363 (2%)
Strand=Plus/Plus
Query 131629 CCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAA 131688
|||| | || || |||||||||| ||||||||||||||| || | ||| || || ||
Sbjct 433851 CCACTCACCATTTTGTTCAACTCTCTTCATAAACAAATCTGGGATCCACAAGGCTGGGAA 433910
Query 131689 CAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAA--AAGTCC 131746
| |||||||||| | | ||||| |||| || |||| || | || || ||
Sbjct 433911 TAAATCTCTAGCTCTGATTTCTTCCTTACC--GTGGTTCTTTCTGATCTCAATGAAATCA 433968
Query 131747 AAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCG 131803
|| || || ||||| ||||| | ||||| || | || ||| | | |||||
Sbjct 433969 AAGATATCACTGTGCCATGGTTCAAGATACAAAGCAAAAGCACCTGGTCTCTTGTTACCA 434028
Query 131804 CCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTG 131863
||||||| ||||| ||| | |||||||| | || || | ||| || | ||| ||
Sbjct 434029 CCTTGATCAACATAACGGGCAGTGTTGTTGAAAACACGAACCATAGGGATAATACCATTA 434088
Query 131864 GCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGT 131923
| | || || || | ||| || ||| ||| | || || |||| || |
Sbjct 434089 GAAGTACCGTTTGTACCAGCAATATAAGCACCAGTGGAACGAATGTTATGAATGTGCAAA 434148
Query 131924 CCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACC 131982
|||||||| || || | ||| || |||| || || | ||| ||||| ||| |||||
Sbjct 434149 CCAATACCACCAGCACTCTTT-GAAATTAAAGCACAAGTCTTTAAAGTGTCATAAATACC 434207
Query 131983 TTC 131985
|||
Sbjct 434208 TTC 434210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933674955680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |