Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq35 111 1e-19 seq69 104 2e-17 >seq35 Length=214301 Score = 111 bits (122), Expect = 1e-19 Identities = 201/291 (69%), Gaps = 5/291 (2%) Strand=Plus/Minus Query 131648 ACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTC 131707 |||| | ||| |||||||| || | ||||||| | || |||| |||||||| | Sbjct 164942 ACTCTTTGCATGAACAAATCTGGAATCCATAACCCATAGAACAAATCTCTAGTTCGAAGT 164883 Query 131708 TCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGT 131767 ||||| | || | |||| ||| ||| |||| ||| || ||||| |||||||| ||| Sbjct 164882 TCTTCATTGCCGTGATTTTTCCTCATATTCAAAATGTCAAAGATGTCAGCATGCCAAGGT 164823 Query 131768 TCCAAATACACTGCCATTGCGCCTTTGCGCTTACC---GCCTTGATTAACATGACGAACC 131824 |||| ||| | ||| | ||| ||| | || || |||||| | ||||| || | Sbjct 164822 TCCATATAGATTGCAAATGCTCCTGGTCTTTTTCCTCCGCCTTGGTCAACATATCGTGCG 164763 Query 131825 ATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTA 131884 |||||||| | |||||||||||||| | | || | | ||||| || || || Sbjct 164762 GTGTTGTTGAAAACGCGCAACATGGGAACTACCCCACCAGATCTCCCATTAGTACTACTA 164703 Query 131885 ATGTAGCTGCCATTG-GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC 131934 |||| || | ||| |||||||| ||||||| | || ||||| || || Sbjct 164702 ATGT-GCGATCCTTGCGCTCTGATATTGTGAATATGGATCCCAATCCCACC 164653 >seq69 Length=709337 Score = 104 bits (114), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 130753 aTTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGG 130812 ||||| ||||| || |||||||||| || | ||| ||| ||||| ||| | || Sbjct 432972 ATTAACAATTTGGAATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGG 433031 Query 130813 TTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCAC 130872 |||||| |||| ||||| || || ||||||| ||| | ||||| ||||| ||||| Sbjct 433032 TTCAAAACATTCATTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCAC 433091 Query 130873 TAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCA 130932 || | ||| || | | ||| || | | | |||| | |||||||||||||||||||| Sbjct 433092 CAACAAAGAGTTTCTCATACCATGTTTGGCAAGTTTTTGTTTCAATTCATCCCAATCCCA 433151 Query 130933 TAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTA 130973 || ||||| || ||| ||||| ||| |||||| Sbjct 433152 TAATTCTGTAGGCTT---TCTGTCCCACAAGTCATATTGTA 433189 Score = 82.4 bits (90), Expect = 6e-11 Identities = 239/363 (66%), Gaps = 9/363 (2%) Strand=Plus/Plus Query 131629 CCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAA 131688 |||| | || || |||||||||| ||||||||||||||| || | ||| || || || Sbjct 433851 CCACTCACCATTTTGTTCAACTCTCTTCATAAACAAATCTGGGATCCACAAGGCTGGGAA 433910 Query 131689 CAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAA--AAGTCC 131746 | |||||||||| | | ||||| |||| || |||| || | || || || Sbjct 433911 TAAATCTCTAGCTCTGATTTCTTCCTTACC--GTGGTTCTTTCTGATCTCAATGAAATCA 433968 Query 131747 AAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCG 131803 || || || ||||| ||||| | ||||| || | || ||| | | ||||| Sbjct 433969 AAGATATCACTGTGCCATGGTTCAAGATACAAAGCAAAAGCACCTGGTCTCTTGTTACCA 434028 Query 131804 CCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTG 131863 ||||||| ||||| ||| | |||||||| | || || | ||| || | ||| || Sbjct 434029 CCTTGATCAACATAACGGGCAGTGTTGTTGAAAACACGAACCATAGGGATAATACCATTA 434088 Query 131864 GCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGT 131923 | | || || || | ||| || ||| ||| | || || |||| || | Sbjct 434089 GAAGTACCGTTTGTACCAGCAATATAAGCACCAGTGGAACGAATGTTATGAATGTGCAAA 434148 Query 131924 CCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACC 131982 |||||||| || || | ||| || |||| || || | ||| ||||| ||| ||||| Sbjct 434149 CCAATACCACCAGCACTCTTT-GAAATTAAAGCACAAGTCTTTAAAGTGTCATAAATACC 434207 Query 131983 TTC 131985 ||| Sbjct 434208 TTC 434210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933674955680