Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq69 293 3e-74
seq70 96.9 4e-15
seq54 91.5 2e-13
seq60 87.8 2e-12
>seq69
Length=709337
Score = 293 bits (324), Expect = 3e-74
Identities = 845/1289 (66%), Gaps = 31/1289 (2%)
Strand=Plus/Plus
Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757
|||||| ||||||||| | |||||||||||||| |||||||| |||||||| |||||
Sbjct 433002 TCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTCATTGTTACCCAAAATTTG 433061
Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTT 110817
|| ||||| || ||||||||||| |||| ||| | | ||| | | ||| | |
Sbjct 433062 TGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTTTCTCATACCATGTTTGGC 433121
Query 110818 GATGCGTTCCTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATG 110875
| || || | ||||||| || || || | | |||| ||||||| |
Sbjct 433122 AAGTTTTTGTTTCAATTCATCCCAATCCCATAATTCTGTAGGCTTTCTG--TCCCACAAG 433179
Query 110876 TCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGG 110935
||| | || | || |||||||| || || || || | |||||||||| | |||||
Sbjct 433180 TCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGTTTCATAAGGACCTTCT 433239
Query 110936 GCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGA 110995
||| ||||||||| || || | | |||||||| || ||||| || || ||
Sbjct 433240 TCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGATAGTTTCGAAAATTTGA 433299
Query 110996 GCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCC 111055
|| | || | ||||| | ||||| ||| || | | | || || ||||
Sbjct 433300 ATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCTTAAAACCATGAAGGCATCA 433359
Query 111056 GCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTC 111115
|| | |||||| || ||||| |||| |||||||||| ||| ||||| || | |||
Sbjct 433360 GCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAGATTT---CTCAGCT 433416
Query 111116 TCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTT 111172
||| || || ||| |||| ||||| ||||||| ||| | || ||||||| ||
Sbjct 433417 TCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTACGAGTAACAACTTTG 433476
Query 111173 GTGATTTCATGAAGTTTTTCATAAT-----CAAAAGTGCGAGTC-TCTTCATTGACATAC 111226
|| | ||||| | || ||| | | ||| ||| | |||| | | | ||
Sbjct 433477 GTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTTGTTCAATAAAC 433536
Query 111227 TTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286
|| | || || |||||||| || || ||||| || || | ||| ||| ||
Sbjct 433537 GAAGGTAAAGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAGCTGAGTATTCG 433596
Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346
| |||||| ||| ||||||||| || || | || |||||||||||||| |||
Sbjct 433597 ACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTTTGGTTGGACTTG 433656
Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406
|||| || |||||||| || | |||| | || || || || || || || | || |
Sbjct 433657 GTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAG 433716
Query 111407 ATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGG---CCCGTCCCTCCGCCTC 111462
|| | | ||| ||| | | | || | |||| || | || || ||| ||
Sbjct 433717 ATGGAGTACCACAACTTTTGAGCCTTG----ATGGTTTTTCTACCACGACCTTCCCTTTC 433772
Query 111463 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 111522
|| ||| ||| | | ||||||| ||||| | ||| | | ||||| || |
Sbjct 433773 ATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCAGCCAATCCTGGAGCTTC 433832
Query 111523 GTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGG 111582
| |||| |||| | | ||| | |||| || ||||| | |||||| || | |||||
Sbjct 433833 ATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAACAAATCTGG 433892
Query 111583 AATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTC 111641
||||||| || || || | ||||||| | | || ||||| | ||| ||||| ||
Sbjct 433893 GATCCACAAGGCTGGGAATAAATCTCTAGCTCTGATT-TCTTCCTTACCGTGGTTCTTTC 433951
Query 111642 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC 111701
| ||||| ||| || | |||||| ||||||||| |||||||| | || | || |
Sbjct 433952 TGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAGCAAAAGCAC 434011
Query 111702 C----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 111757
| || | | || | |||||| ||||| || || ||| ||| || || |||| |
Sbjct 434012 CTGGTCTCTTGTTACC-ACCTTGATCAACATAACGGGCAGTGTTGTTGAAAACACGAACC 434070
Query 111758 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 111817
|| || |||||||||| || ||| ||||| || |||| || | ||| |
Sbjct 434071 ATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACCAGTGGAACGA 434130
Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877
| | ||| ||||||| |||||||| ||||| | |||||| ||| ||||| | |
Sbjct 434131 ATGTTATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAGCACAAGTCTTT 434190
Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937
| ||| |||| ||||| | || || || || || | || | | ||| ||| |||
Sbjct 434191 AAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGAC 434250
Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAA 111966
|| || ||| |||| ||||||||||| ||
Sbjct 434251 ATTTGTGGTTTTGGAGTACCAGCATTAAA 434279
>seq70
Length=247326
Score = 96.9 bits (106), Expect = 4e-15
Identities = 280/425 (66%), Gaps = 11/425 (3%)
Strand=Plus/Plus
Query 11535 TGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTG 11594
||||||| || ||||| || | ||||||||| | ||| |||||||||||| || |
Sbjct 28286 TGTCAAACCCGTCCATTTCAACCAATAATTGATTCAATGTAGTTTCTCTCTCATCGTTGG 28345
Query 11595 C-----TGGCATACCACCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAA 11649
| | |||| | | | | |||||| || | |||||||| ||||||| ||
Sbjct 28346 CGCCTGTTGCATTTCCCTTTGAT--CTTTGCTTACCAATTGCATCAATTTCATCAACAAA 28403
Query 11650 GACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACC 11709
||||| |||| |||||| | || ||| || | ||| || || | | ||||||
Sbjct 28404 CACAATCGATGGAGCATTTTCTCTTGCAGTTTTGAACAAATCACGTACACGTGAGGCACC 28463
Query 11710 CACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGAT-GAATGGGACATTTG 11768
|||||||||||||| || ||||| | | |||| || | || || || ||| |
Sbjct 28464 TACACCAACAAACATTTCAACAAATTCCGAACCAGA-AACAGAATAAAACGGAACACCAG 28522
Query 11769 ATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAA 11828
|||||| || ||||| ||||| | || || || || || || ||| | ||||
Sbjct 28523 CTTCACCAGCTGTGGCTTTAGCGAGTAATGTTTTACCTGTTCCCGGAGGACCTGAAAGAA 28582
Query 11829 GGGCGCCTCGGGGGATCTTGGCACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAAT 11888
|| || || ||||| || |||||| | |||| | ||||| | ||| ||||
Sbjct 28583 TAGCACCGCGAGGGATTTTTGCACCAAGTTTTTCATATTTTTCGGGAT-TTTGCAAAAAG 28641
Query 11889 C-CACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATCCCCTCAACATCACTGAAGCGG 11947
| ||||| ||| | ||| | ||| ||| | | || || ||||||| |||| |
Sbjct 28642 CTCACAAACTCGGTGACTTCTTGTTTTGCCTCCGCCATACCTGCAACATCCTTGAACTTG 28701
Query 11948 GTTTT 11952
|||||
Sbjct 28702 GTTTT 28706
>seq54
Length=356724
Score = 91.5 bits (100), Expect = 2e-13
Identities = 185/274 (68%), Gaps = 8/274 (3%)
Strand=Plus/Minus
Query 181775 ttttGTGAAGATATACCTCGTTTGAGAAGCGTCTTTACCACCCATGAGACGC----GTAC 181830
|| ||| |||||||| |||| || ||| ||||||||||| || ||| | ||
Sbjct 256983 TTCTGTAAAGATATATCTCGCAGCAGCAGCATCTTTACCACC----AGTCGCTCTTGAAC 256928
Query 181831 CAAATTGACCACATGGCTCAAGAAGGTTAATGTTGTTTGAACCTGTATAGTCGTTGGCCA 181890
| || |||| ||||| | || ||| ||||||||||| || | ||| | ||||
Sbjct 256927 CGAAAGCACCATTTGGCTTCAAAATGTTGATGTTGTTTGATCCGACAAAGTTTTGTGCCA 256868
Query 181891 ACTTAACGATGGTATCCGCAAGGGACACTTCACCGTGGTGGTAAGCTGACTTGTCCGCAA 181950
| || ||| || | | | | || |||||||| || ||||| ||| || || |
Sbjct 256867 AACCAATGATTGTTTGCACTAATGAGACTTCACCATGATGGTATCCTGTGTTTTCACTTA 256808
Query 181951 CATATGCCGCCAACTGTGCCACCTTCATTTCATCTTTGAGGTTCTTGTGGAAGCAAGCAT 182010
||||||| ||||| || ||||| || |||||| ||| | ||| | | ||| ||| ||
Sbjct 256807 CATATGCTGCCAATTGCGCCACTTTGATTTCACTTTTCAAGTTTCTCTTGAAACAACCAA 256748
Query 182011 ACATCACTTTCCTCTGCGAAGGCTTGAGACCATC 182044
||| || || || || ||||| | ||||||
Sbjct 256747 ACAAAACCTTTCTTTGACCTGGCTTCAAACCATC 256714
>seq60
Length=402545
Score = 87.8 bits (96), Expect = 2e-12
Identities = 175/258 (68%), Gaps = 6/258 (2%)
Strand=Plus/Minus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
||||| ||||| || ||||| || ||||| ||||| || ||||| ||| | |||||
Sbjct 120767 TATGGACGTGTAGCTCCACGTTCAGGTCTTGCTGTCAAACATGGAATTTCAACCGGTGCT 120708
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723
|| || |||||| | || || |||||||| ||||| || | || ||||| |||
Sbjct 120707 GGGGTAATTGATGCTGATTACCGGGGTGAAGTTAAAGTTGTCTTGTTTAATCATTCAGAT 120648
Query 164724 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGCTGTGAA 164783
||| | ||||| | || || || ||| | || || ||| | || | || | || |
Sbjct 120647 AAACATTTTGAAATTAAAAAGGGAGATAGAATTGCTCAATTAGTTTTGGAAAGAATTGTA 120588
Query 164784 ACACCCGATGTGGAGGAAATTGGTGT-----TCTTG-AAGAGACGGAGAGAGGTGCGGGT 164837
| | ||| |||||||||||| | | ||| | | || || | |||| ||
Sbjct 120587 AATGCTGATTTGGAGGAAATTGATTTGGAAGGATTGTCAAATACTGAACGTGGTGAAGGA 120528
Query 164838 GGATTTGGATCTACTGGT 164855
||||||||||| ||||||
Sbjct 120527 GGATTTGGATCGACTGGT 120510
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030900944000
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