Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq69 284 1e-71 seq60 89.7 6e-13 >seq69 Length=709337 Score = 284 bits (314), Expect = 1e-71 Identities = 833/1274 (65%), Gaps = 21/1274 (2%) Strand=Plus/Minus Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 || ||||||||||| |||| ||| |||||||| ||| ||| | | || | || || Sbjct 434279 TTTAATGCTGGTACTCCAAAACCACAAATGTCATCTTGTTTCTTGGTTGCAATGAAAGAA 434220 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 || || || | ||||| |||| ||| | | | ||||| ||| |||||| | ||| Sbjct 434219 GATTCTATTGAAGGTATTTATGACACTTTAAAGACTTGTGCTTTAATTTCAAAGAGTGCT 434160 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 104518 || |||||||| ||||||| ||| | | | ||| | || |||| || ||| Sbjct 434159 GGTGGTATTGGTTTGCACATTCATAACATTCGTTCCACTGGTGCTTATATTGCTGGTACA 434100 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || ||| || |||||||||| || ||| |||| || || ||| ||| || || ||| Sbjct 434099 AACGGTACTTCTAATGGTATTATCCCTATGGTTCGTGTTTTCAACAACACTGCCCGTTAT 434040 Query 104579 GTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 || |||||| ||| | | || || || | || | |||||||| |||||||| Sbjct 434039 GTTGATCAAGGTGGTAA-CAAGAGACCAGGTGCTTTTGCTTTGTATCTTGAACCATGGCA 433981 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 | |||||| | || ||| ||||| | | ||||| ||| | || || | | | Sbjct 433980 CAGTGATATCTTTGATTTCATTGAGATCAGAAAGAACCACGGTAAGGAAGAAAT-CAGAG 433922 Query 104695 CC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | | ||| | ||| | || | ||||| |||||| | || |||||||||||||| | | Sbjct 433921 CTAGAGATTTATTCCCAGCCTTGTGGATCCCAGATTTGTTTATGAAGAGAGTTGAACAAA 433862 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| | ||| | | || | |||| | | || || || | | || | |||| Sbjct 433861 ATGGTGAGTGGACATTGTTCTCTCCAAATGAAGCTCCAGGATTGGCTGACACTTATGGTG 433802 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873 | ||||||| | | ||| ||| || || |||||||| | | || | Sbjct 433801 ACGAGTTTGTTGAGTTGTACGAAAAATATGAAAGGGAAGGTCGTGGTAGAAAAACCATCA 433742 Query 104874 CAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACA 104933 ||| | ||||| | | || | | |||||||||| |||||||| |||| || Sbjct 433741 AGGCTCAAAAGTTGTGGTACTCCATCTTGGAAGCTCAAACCGAAACTGGTACCCCATTCA 433682 Query 104934 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGA 104993 || | || || || || |||||| ||| || ||||||||||| ||| | ||||| Sbjct 433681 TGTTGTATAAGGATGCTTGTAACACCAAGTCCAACCAAAAGAATTTAGGTATTATCAAAT 433622 Query 104994 GTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTA 105053 |||||| | ||| ||||| | |||| ||| ||| || ||||| |||| Sbjct 433621 CTTCCAACTTGTGTTGTGAAATTGTCGAATACTCAGCTCCAGACGAAGTTGCTGTCTGTA 433562 Query 105054 ACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG----- 105107 || | ||||| || ||| | || || | | || | ||| | ||| || ||| Sbjct 433561 ACTTGGCATCGATTGCTTTACCTTCGTTTATTGAACAAGATGGTAAACACGCTTGGTACA 433502 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 | | ||| || | || || ||||| ||| ||| || ||| | |||||||| || | Sbjct 433501 ACTTTGACAAGTTGCATGATGTTACCAAAGTTGTTACTCGTAACTTGAACAGAGTCATAG 433442 Query 105168 ATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 105224 | || |||| |||||| || ||| ||| |||||||| ||||||||| | |||| Sbjct 433441 ACAGGAATTATTACCCAGTCCCTGA---AGCTGAGAAATCTAACATGAGACACAGACCAA 433385 Query 105225 TTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATT 105284 ||| | || || || ||| | || |||| ||||| ||| | || ||| |||| Sbjct 433384 TTGCATTGGGAGTCCAAGGTTTGGCTGATGCCTTCATGGTTTTAAGAATCGGATTCGATT 433325 Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344 || | ||||| | ||| | || | || || || || || |||||||| ||| ||| Sbjct 433324 CCCAAGAAGCTAGAGAATTAAACATTCAAATTTTCGAAACTATCTATCACGCTGCTGTTG 433265 Query 105345 AGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404 | || | || |||||| | | || ||||| |||||||||| | || || |||| Sbjct 433264 AAGCTTCTATTGAATTGGCACAAGAAGAAGGTCCTTATGAAACCTACCAAGGATCACCAG 433205 Query 105405 CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA-AGCTTCACTACGAC 105463 | || ||||| || | |||| ||| ||||||| | || | | || | | | || Sbjct 433204 CATCCCAAGGTTTGTTACAATATGACTTGTGGGACAGAAAGCCTACAGAATTA-TGGGAT 433146 Query 105464 TGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 ||||| | | || || | | | ||| | | ||| | | | ||||| Sbjct 433145 TGGGATGAATTGAAACAAAAACTTGCCAAACATGGTATGAGAAACTCTTTGTTGGTGGCT 433086 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 ||||||||||| || ||||| ||||||| |||||||| |||||||| |||||||| ||| Sbjct 433085 CCAATGCCAACCGCTTCCACATCACAAATTTTGGGTAACAATGAATGTTTTGAACCATAC 433026 Query 105584 ACGACGAACATCTA 105597 || |||||||||| Sbjct 433025 ACTTCGAACATCTA 433012 Score = 107 bits (118), Expect = 2e-18 Identities = 338/514 (66%), Gaps = 16/514 (3%) Strand=Plus/Plus Query 94730 AAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAA 94786 |||| ||||| ||| ||||||| || |||||||| || | ||| | ||| | Sbjct 558253 AAACCATTCCGCAAATTAAAAAGAAGGCTGATTGGGCCATCAGATGGATCCAAGATTCCG 558312 Query 94787 AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCT 94846 || || || ||||||||| || | | || || || |||||| |||||||| ||| Sbjct 558313 AG--GCATTG-TTTGCTGAGAGATTGGTTGCTTTCGCTGCTGTTGAAGGTATCTTTTTCA 558369 Query 94847 CTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGC 94905 |||||| || ||| |||||| ||| | ||||| ||||| | |||||||| | Sbjct 558370 GTGGTTCATT-TGCATCTATTTTCTGGTTGAAGAAAAGAGGTTTGATGCCAGGATTAACT 558428 Query 94906 TTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAAC 94963 ||||||||||| | || | ||||||||| || | ||| || || || | | Sbjct 558429 TTCTCCAACGAATTAATTTGTCGTGACGAAGGTTTACACACTGATTTCGCATGTTTATTA 558488 Query 94964 TTTTCAAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAG 95023 ||| | || || | || |||| | ||| || | ||| ||| |||| Sbjct 558489 TTTGCTCAT--TTACAACATAGACCAGATCCAAAGATCGTTGAAAGAATTATTACTGAAG 558546 Query 95024 CCGTTGAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGA 95083 | ||||| ||||| |||| |||| | ||||| | ||| | | | ||||||| Sbjct 558547 CTGTTGAAATTGAAAAAGAATTCTTTACTGATGCTTTACCAGTTAGTTTATTGGGTATGA 558606 Query 95084 ATTCTGAAAAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCG 95143 ||| | || ||||| | ||||| | || | ||| |||||||||| ||| | | | Sbjct 558607 ATTGTAAATTAATGTGTCAATATGTCGAATTTGTTGCTGATAGATTATTG--GTTGCTTT 558664 Query 95144 GGGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCT 95201 |||| || ||| || || ||||||||||| || ||||| |||||| | | Sbjct 558665 GGGTAATAAAAAAGTTTACAATGTCACTAATCCATTTGATTTTATGGAAAACATTTCCTT 558724 Query 95202 CGACGGGAAGACAAACTTCTTCGAAAAGAGGGTT 95235 | |||||||| || ||||| |||||||| ||| Sbjct 558725 GGCTGGGAAGACCAATTTCTTTGAAAAGAGAGTT 558758 >seq60 Length=402545 Score = 89.7 bits (98), Expect = 6e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 154106 TATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCG 154165 ||||| ||||| || ||||| || ||||| ||||| |||||||| || | ||||| Sbjct 120767 TATGGACGTGTAGCTCCACGTTCAGGTCTTGCTGTCAAACATGGAATTTCAACCGGTGCT 120708 Query 154166 GGTGTTGTTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGAC 154225 || || ||||| | || ||| ||||||||| ||||| || | || ||||| ||| Sbjct 120707 GGGGTAATTGATGCTGATTACCGGGGTGAAGTTAAAGTTGTCTTGTTTAATCATTCAGAT 120648 Query 154226 AAAGACTTTGAGGTAAAGAGGGGTGAGCGCATCGCACAACTTGTTCTTGAGAGGTGTGAG 154285 ||| | ||||| | || | ||| || | || || ||| | ||| | || || || Sbjct 120647 AAACATTTTGAAATTAAAAAGGGAGATAGAATTGCTCAATTAGTTTTGGAAAGAATTGTA 120588 Query 154286 ACACCCGATGTGGAGGAAATTG 154307 | | ||| |||||||||||| Sbjct 120587 AATGCTGATTTGGAGGAAATTG 120566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259779293600