Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq69 132 5e-26 seq54 129 7e-25 seq41 111 2e-19 >seq69 Length=709337 Score = 132 bits (146), Expect = 5e-26 Identities = 665/1049 (63%), Gaps = 33/1049 (3%) Strand=Plus/Plus Query 80715 CATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA 80774 |||||| | ||||||| || || || || | || || || | ||| | | |||| || Sbjct 433347 CATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAGA 433406 Query 80775 TCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGT 80834 | ||| || || || | ||||||| | || | || ||||| | ||||| ||| || || Sbjct 433407 TTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTACGAGT 433466 Query 80835 AACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT------TGGTTCCC--CTTC 80886 |||||| ||||||||||| | || | ||||| | | || || || ||| Sbjct 433467 AACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTTG 433526 Query 80887 ACAAATGCCGGAAGGCTCAGG----GACGCCAGATTGCACACGGCCACCTCTTCAGCATC 80942 ||| ||||| || || |||| || || || || || || || | | | Sbjct 433527 TTCAATAAACGAAGGTAAAGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAGC 433586 Query 80943 TGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTG 81002 || | ||||| ||||| ||||| || ||||| || || |||| | || || || Sbjct 433587 TGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTTTG 433646 Query 81003 GTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062 ||| ||||||| ||| ||||| ||||| || ||||| | |||||||| || ||| || Sbjct 433647 GTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTTG 433706 Query 81063 TGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTC 81122 | | | ||||| || ||| | || | ||||||| || | ||||| Sbjct 433707 AGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTTTTTCTACCACGACCTTC 433766 Query 81123 GGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGT-TCAGTGAGGTCTG 81181 |||| || |||| || | |||| | |||| | |||| |||| | ||| Sbjct 433767 CCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCAT-AAGTGTCAGCCAATCCTG 433825 Query 81182 GGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAG 81241 | || || || | | || ||| || | | || || |||||| || Sbjct 433826 GAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAACA 433885 Query 81242 CGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCT--CCTCATCACCCTG 81299 || |||||||| | ||| | ||| | || | ||| | | | || | ||| || Sbjct 433886 AATCTGGGATCCACAAGGCTGGGAATAAATCTCT--AGCTCTGATTTCTTCCTTACCGTG 433943 Query 81300 GTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGC 81359 ||| | | ||| | || || | ||| || |||||||| || ||||||| || Sbjct 433944 GTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAGC 434003 Query 81360 GATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAA 81413 | | || |||| || |||| || | || ||||||||||| ||| || Sbjct 434004 AAAAGCACCTGGTCTCTTGTTAC---CACCTTGATCAACATAACGGGCAGTGTTGTTGAA 434060 Query 81414 TACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCC 81473 ||||| | ||||||||| ||||||| || |||||| ||||| | ||| | || Sbjct 434061 AACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACC 434120 Query 81474 CTTGGCGCGCACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAG 81532 ||| || | || ||| || | ||| || ||||| | | ||||||||| || Sbjct 434121 AGTGGAACGAATGTT-ATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAG 434179 Query 81533 CACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGA 81592 |||| || | || |||||||| || || || ||||| |||||| ||| ||||| Sbjct 434180 CACAAGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGA 434239 Query 81593 AACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTG 81650 |||| |||||| || || |||| ||| || ||||| || | || | | || Sbjct 434240 AACAAGATGACATTTGTGG--TTTTGGAGTACCAGCATTAAATAAACAAGGAGAACCATG 434297 Query 81651 AATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACC 81710 | || || | | ||||||| || ||| ||||| |||| | ||| ||||| || Sbjct 434298 GGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCCCTTCC 434357 Query 81711 GTGAATACCGATAGCTACACGCATAAACA 81739 || ||||||||||| || | ||||| || Sbjct 434358 ATGTATACCGATAGCAACTCTCATAATCA 434386 >seq54 Length=356724 Score = 129 bits (142), Expect = 7e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || || ||||| || || || || ||| | || ||||||||| Sbjct 21660 AATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTCATC 21719 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||||| ||| | || | || || || |||||||| ||||| |||||||| || Sbjct 21720 TGACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGATCA 21779 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | || ||||||||||| ||| | || |||| | ||| || | ||||| || Sbjct 21780 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTACAA 21839 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | ||||||||||||||| | || | |||||| Sbjct 21840 CATTCAAAAGGAATCCACTTTGCACTTGGTCTTG 21873 >seq41 Length=287713 Score = 111 bits (122), Expect = 2e-19 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || ||||| || | ||||| ||||| || || | || ||||| || Sbjct 13038 AATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTC 13097 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | |||| ||| | ||| |||| || |||||||| || || ||||| |||||||| Sbjct 13098 CGACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTATTCCACCAGACCA 13157 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | || ||||||||||| ||| | || || | | | || ||| | ||||| || Sbjct 13158 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTATCTGACTACAA 13217 Query 27585 TGTCCAAAAGGAATCCACT 27603 ||||||| ||||| ||| Sbjct 13218 CATCCAAAAAGAATCTACT 13236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309401956800