Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq69 132 5e-26
seq54 129 7e-25
seq41 111 2e-19
>seq69
Length=709337
Score = 132 bits (146), Expect = 5e-26
Identities = 665/1049 (63%), Gaps = 33/1049 (3%)
Strand=Plus/Plus
Query 80715 CATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA 80774
|||||| | ||||||| || || || || | || || || | ||| | | |||| ||
Sbjct 433347 CATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGTTAGA 433406
Query 80775 TCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGT 80834
| ||| || || || | ||||||| | || | || ||||| | ||||| ||| || ||
Sbjct 433407 TTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTACGAGT 433466
Query 80835 AACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT------TGGTTCCC--CTTC 80886
|||||| ||||||||||| | || | ||||| | | || || || |||
Sbjct 433467 AACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCATCTTG 433526
Query 80887 ACAAATGCCGGAAGGCTCAGG----GACGCCAGATTGCACACGGCCACCTCTTCAGCATC 80942
||| ||||| || || |||| || || || || || || || | | |
Sbjct 433527 TTCAATAAACGAAGGTAAAGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTGGAGC 433586
Query 80943 TGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTG 81002
|| | ||||| ||||| ||||| || ||||| || || |||| | || || ||
Sbjct 433587 TGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCTTTTG 433646
Query 81003 GTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062
||| ||||||| ||| ||||| ||||| || ||||| | |||||||| || ||| ||
Sbjct 433647 GTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGGTTTG 433706
Query 81063 TGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTC 81122
| | | ||||| || ||| | || | ||||||| || | |||||
Sbjct 433707 AGCTTCCAAGATGGAGTACCACAACTTTTGAGCCTTGATGGTTTTTCTACCACGACCTTC 433766
Query 81123 GGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGT-TCAGTGAGGTCTG 81181
|||| || |||| || | |||| | |||| | |||| |||| | |||
Sbjct 433767 CCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCAT-AAGTGTCAGCCAATCCTG 433825
Query 81182 GGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAG 81241
| || || || | | || ||| || | | || || |||||| ||
Sbjct 433826 GAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTCATAAACA 433885
Query 81242 CGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCT--CCTCATCACCCTG 81299
|| |||||||| | ||| | ||| | || | ||| | | | || | ||| ||
Sbjct 433886 AATCTGGGATCCACAAGGCTGGGAATAAATCTCT--AGCTCTGATTTCTTCCTTACCGTG 433943
Query 81300 GTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGC 81359
||| | | ||| | || || | ||| || |||||||| || ||||||| ||
Sbjct 433944 GTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATACAAAGC 434003
Query 81360 GATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAA 81413
| | || |||| || |||| || | || ||||||||||| ||| ||
Sbjct 434004 AAAAGCACCTGGTCTCTTGTTAC---CACCTTGATCAACATAACGGGCAGTGTTGTTGAA 434060
Query 81414 TACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCC 81473
||||| | ||||||||| ||||||| || |||||| ||||| | ||| | ||
Sbjct 434061 AACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCACC 434120
Query 81474 CTTGGCGCGCACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAG 81532
||| || | || ||| || | ||| || ||||| | | ||||||||| ||
Sbjct 434121 AGTGGAACGAATGTT-ATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAAG 434179
Query 81533 CACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGA 81592
|||| || | || |||||||| || || || ||||| |||||| ||| |||||
Sbjct 434180 CACAAGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGA 434239
Query 81593 AACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTG 81650
|||| |||||| || || |||| ||| || ||||| || | || | | ||
Sbjct 434240 AACAAGATGACATTTGTGG--TTTTGGAGTACCAGCATTAAATAAACAAGGAGAACCATG 434297
Query 81651 AATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACC 81710
| || || | | ||||||| || ||| ||||| |||| | ||| ||||| ||
Sbjct 434298 GGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCCCTTCC 434357
Query 81711 GTGAATACCGATAGCTACACGCATAAACA 81739
|| ||||||||||| || | ||||| ||
Sbjct 434358 ATGTATACCGATAGCAACTCTCATAATCA 434386
>seq54
Length=356724
Score = 129 bits (142), Expect = 7e-25
Identities = 157/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || || || || ||||| || || || || ||| | || |||||||||
Sbjct 21660 AATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTCATC 21719
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||||| ||| | || | || || || |||||||| ||||| |||||||| ||
Sbjct 21720 TGACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGATCA 21779
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | || ||||||||||| ||| | || |||| | ||| || | ||||| ||
Sbjct 21780 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTACAA 21839
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||||||||||||| | || | ||||||
Sbjct 21840 CATTCAAAAGGAATCCACTTTGCACTTGGTCTTG 21873
>seq41
Length=287713
Score = 111 bits (122), Expect = 2e-19
Identities = 144/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || ||||| || | ||||| ||||| || || | || ||||| ||
Sbjct 13038 AATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTC 13097
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| ||| | ||| |||| || |||||||| || || ||||| ||||||||
Sbjct 13098 CGACACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTATTCCACCAGACCA 13157
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | || ||||||||||| ||| | || || | | | || ||| | ||||| ||
Sbjct 13158 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTATCTGACTACAA 13217
Query 27585 TGTCCAAAAGGAATCCACT 27603
||||||| ||||| |||
Sbjct 13218 CATCCAAAAAGAATCTACT 13236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309401956800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |