Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq41 129 5e-25
seq54 125 6e-24
>seq41
Length=287713
Score = 129 bits (142), Expect = 5e-25
Identities = 184/259 (71%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 26956 ATAAGAGCAATAAATTTTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCG 27015
|| |||| | | ||||| |||| | | | ||||| || || || |||||| | ||||
Sbjct 13011 ATCAGAGTATTCAATTTATTAAATCACA----ATGCAAATTTTCGTCAAAACTTTAACCG 13066
Query 27016 GCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAA 27075
| ||| | || || | ||||| ||| | |||||| | ||||| | ||||| || |
Sbjct 13067 GTAAGACCATCACCTTGGAAGTTGAATCTTCCGACACTATTGACAATGTCAAGTCTAAGA 13126
Query 27076 TTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAAT 27135
| || ||||||||||| || ||||| || ||||| | || || | || || |||||||
Sbjct 13127 TCCAGGACAAAGAAGGTATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAACAAT 13186
Query 27136 TGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGG 27195
| |||||| || || | || || |||||||| ||||| || || || || || ||||
Sbjct 13187 TAGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAAGAATCTACTTTGCACTTGG 13246
Query 27196 TTTTGCGTTTGCGGGGTGG 27214
| ||| | ||| | |||||
Sbjct 13247 TGTTGAGATTGAGAGGTGG 13265
>seq54
Length=356724
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| || || || || | || ||| | ||||| || | ||
Sbjct 21661 ATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTCATCT 21720
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || ||| || || |||||||| ||||| || || || ||||||
Sbjct 21721 GACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGATCAA 21780
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || |||||||||||||| | ||| | ||||| ||||||
Sbjct 21781 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTACAAC 21840
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||||||||| || || || || ||||| ||| | ||| | |||||
Sbjct 21841 ATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 21887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917638892800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |