Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq41 129 5e-25 seq54 125 6e-24 >seq41 Length=287713 Score = 129 bits (142), Expect = 5e-25 Identities = 184/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 26956 ATAAGAGCAATAAATTTTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCG 27015 || |||| | | ||||| |||| | | | ||||| || || || |||||| | |||| Sbjct 13011 ATCAGAGTATTCAATTTATTAAATCACA----ATGCAAATTTTCGTCAAAACTTTAACCG 13066 Query 27016 GCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAA 27075 | ||| | || || | ||||| ||| | |||||| | ||||| | ||||| || | Sbjct 13067 GTAAGACCATCACCTTGGAAGTTGAATCTTCCGACACTATTGACAATGTCAAGTCTAAGA 13126 Query 27076 TTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAAT 27135 | || ||||||||||| || ||||| || ||||| | || || | || || ||||||| Sbjct 13127 TCCAGGACAAAGAAGGTATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAACAAT 13186 Query 27136 TGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGG 27195 | |||||| || || | || || |||||||| ||||| || || || || || |||| Sbjct 13187 TAGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAAGAATCTACTTTGCACTTGG 13246 Query 27196 TTTTGCGTTTGCGGGGTGG 27214 | ||| | ||| | ||||| Sbjct 13247 TGTTGAGATTGAGAGGTGG 13265 >seq54 Length=356724 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || || || || | || ||| | ||||| || | || Sbjct 21661 ATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTCATCT 21720 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || |||||||| ||||| || || || |||||| Sbjct 21721 GACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCAGATCAA 21780 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || |||||||||||||| | ||| | ||||| |||||| Sbjct 21781 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTACAAC 21840 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||||||||| || || || || ||||| ||| | ||| | ||||| Sbjct 21841 ATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 21887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917638892800