Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq54 143 6e-29 seq41 113 1e-19 >seq54 Length=356724 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | |||||| || ||||| ||||| || || | | ||| ||||| Sbjct 21876 TCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCC 21817 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || || ||||| | | |||||| || ||||| | ||||||||| Sbjct 21816 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTT 21757 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| ||| || || || ||||||||||| ||||| || | |||||| Sbjct 21756 GTCTTGGATCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGAT 21697 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || ||||| || || || || || | |||||||| Sbjct 21696 GGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658 >seq41 Length=287713 Score = 113 bits (124), Expect = 1e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||| || |||||||||||||| || || | || || || || ||||| | || Sbjct 13242 GTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCTAATTG 13183 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || || ||||| | | ||||||||| || |||| ||||| |||||||||||||| Sbjct 13182 TTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCCTGGATCTT 13123 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || || || || ||||| || |||||| || | ||||| ||||| || || Sbjct 13122 AGACTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATGGTCTTACCGGT 13063 Query 211091 GAGAGTCTTTACAAACACCTGCATT 211115 | ||| || || || | |||||| Sbjct 13062 TAAAGTTTTGACGAAAATTTGCATT 13038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159149920771100