Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq54 143 6e-29
seq41 113 1e-19
>seq54
Length=356724
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | |||||| || ||||| ||||| || || | | ||| |||||
Sbjct 21876 TCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCC 21817
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| || || || || ||||| | | |||||| || ||||| | |||||||||
Sbjct 21816 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTT 21757
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| ||| || || || ||||||||||| ||||| || | ||||||
Sbjct 21756 GTCTTGGATCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGAT 21697
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || ||||| || || || || || | ||||||||
Sbjct 21696 GGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658
>seq41
Length=287713
Score = 113 bits (124), Expect = 1e-19
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | ||| || |||||||||||||| || || | || || || || ||||| | ||
Sbjct 13242 GTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCTAATTG 13183
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || || ||||| | | ||||||||| || |||| ||||| ||||||||||||||
Sbjct 13182 TTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCCTGGATCTT 13123
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || || || || ||||| || |||||| || | ||||| ||||| || ||
Sbjct 13122 AGACTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATGGTCTTACCGGT 13063
Query 211091 GAGAGTCTTTACAAACACCTGCATT 211115
| ||| || || || | ||||||
Sbjct 13062 TAAAGTTTTGACGAAAATTTGCATT 13038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159149920771100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |