Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq54 161 7e-35
seq41 125 5e-24
>seq54
Length=356724
Score = 161 bits (178), Expect = 7e-35
Identities = 176/231 (76%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||| ||||||||||||||||| ||||| ||||| |||||| | |||||||| ||
Sbjct 21658 AAAATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTCA 21717
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| |||| ||| ||||| | || || ||||| ||||| | || |||||
Sbjct 21718 TCTGACACCATTGACAATGTTAAATC-CAAGATCCAAGACAAGGAAGGAATCCCTCCAGA 21776
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|||||| | || || ||||| || |||||| ||||||| | | | || ||| ||| ||
Sbjct 21777 TCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTA 21836
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| ||||| || ||||| || || || || || || ||| |||| ||
Sbjct 21837 CAACATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 21887
>seq41
Length=287713
Score = 125 bits (138), Expect = 5e-24
Identities = 177/245 (72%), Gaps = 3/245 (1%)
Strand=Plus/Plus
Query 23595 CAATTAATTACTTAA-AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTC 23653
||||| |||| | | |||||| |||||||| ||||| | || || || || |||||
Sbjct 13022 CAATTTATTAAATCACAATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCT 13081
Query 23654 TCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAA 23712
| |||||||| || | |||||| |||| ||| | || | || | | |||||||||
Sbjct 13082 TGGAAGTTGAATCTTCCGACACTATTGACAATGTCAAGTCTAAGA-TCCAGGACAAAGAA 13140
Query 23713 GGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGC 23772
||| | || ||||| ||||| | || || ||||| || |||||| | ||||||| |
Sbjct 13141 GGTATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGA 13200
Query 23773 ACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGA 23832
||| || || |||||||| |||||||| || || || || || || || || ||| ||
Sbjct 13201 ACTCTATCTGACTACAACATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGA 13260
Query 23833 GGAGG 23837
|| ||
Sbjct 13261 GGTGG 13265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009023271120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |