Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq54 161 7e-35 seq41 125 5e-24 >seq54 Length=356724 Score = 161 bits (178), Expect = 7e-35 Identities = 176/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| ||||||||||||||||| ||||| ||||| |||||| | |||||||| || Sbjct 21658 AAAATGCAAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAGTCA 21717 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| |||| ||| ||||| | || || ||||| ||||| | || ||||| Sbjct 21718 TCTGACACCATTGACAATGTTAAATC-CAAGATCCAAGACAAGGAAGGAATCCCTCCAGA 21776 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||| | || || ||||| || |||||| ||||||| | | | || ||| ||| || Sbjct 21777 TCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGACTA 21836 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| ||||| || ||||| || || || || || || ||| |||| || Sbjct 21837 CAACATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 21887 >seq41 Length=287713 Score = 125 bits (138), Expect = 5e-24 Identities = 177/245 (72%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 23595 CAATTAATTACTTAA-AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTC 23653 ||||| |||| | | |||||| |||||||| ||||| | || || || || ||||| Sbjct 13022 CAATTTATTAAATCACAATGCAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCT 13081 Query 23654 TCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAA 23712 | |||||||| || | |||||| |||| ||| | || | || | | ||||||||| Sbjct 13082 TGGAAGTTGAATCTTCCGACACTATTGACAATGTCAAGTCTAAGA-TCCAGGACAAAGAA 13140 Query 23713 GGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGC 23772 ||| | || ||||| ||||| | || || ||||| || |||||| | ||||||| | Sbjct 13141 GGTATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGA 13200 Query 23773 ACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGA 23832 ||| || || |||||||| |||||||| || || || || || || || || ||| || Sbjct 13201 ACTCTATCTGACTACAACATCCAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGA 13260 Query 23833 GGAGG 23837 || || Sbjct 13261 GGTGG 13265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009023271120