Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq41 158 3e-33
seq54 147 5e-30
seq123 95.1 3e-14
seq58 93.3 1e-13
>seq41
Length=287713
Score = 158 bits (174), Expect = 3e-33
Identities = 165/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | ||| ||||||||||||| ||||| || | | |||||| ||
Sbjct 13254 TCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 13195
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||| || || ||||| ||||| | || ||||||||| || ||||||||||| ||
Sbjct 13194 GTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTT 13135
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| |||||||| ||| ||| || || ||||| || | ||| || || || |||||
Sbjct 13134 GTCCTGGATCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGAT 13075
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| || || |||||||| | ||| | |||||||
Sbjct 13074 GGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCATT 13038
>seq54
Length=356724
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | ||||||||| ||||| | ||||| |||| || ||||| ||
Sbjct 21876 TCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCC 21817
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| ||||| | || |||||| || || || || ||||||||
Sbjct 21816 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTT 21757
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| || ||| || |||||||| || | || || || || |||||
Sbjct 21756 GTCTTGGATCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGAT 21697
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| || ||||| | ||||| | ||| | |||||||||
Sbjct 21696 GGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658
>seq123
Length=21916
Score = 95.1 bits (104), Expect = 3e-14
Identities = 163/237 (69%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 7492 TCTATGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGC 7551
||| | ||||| || ||||||||| ||| || ||| ||| | || || || |
Sbjct 13266 TCTGTTATTATTAGATTAGAATTATCTGGACCTGGTGATCAGTTCTTACATGAAAACCGT 13207
Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611
||| |||| || ||| | |||| | ||||| | | |||||||||||| || ||||||
Sbjct 13206 CAAGTTTATAATGTTTTAGTTACTGGACATGCTATAGCTATGATTTTCTTATTCGTTATG 13147
Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671
|| || | || || | || || || | ||| | ||| | ||||||||||| |||
Sbjct 13146 CCTGTATTAATTGGTGCCTTTGGTAACTTCTTCTTACCTATCATGATTGGTGCAGTAGAT 13087
Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTT 7728
||||| ||| | || | || || || ||||| |||| |||| ||| | ||| ||
Sbjct 13086 ATGGCATTTGCTAGATTAAATAACATTAGTTTCTGATGTTTACCTCCTGCATTAGTT 13030
>seq58
Length=253217
Score = 93.3 bits (102), Expect = 1e-13
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||||||||| || |||||||| || || ||||||||||| ||||||||
Sbjct 230404 GAAAATTTGACCATCAGTAATGGAAATAACATTGGTTGGAATATAAGCAGAGACATCACC 230463
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575
|||| ||||| | | || || || || | ||| ||||| |||
Sbjct 230464 ACCTTGGGTTTCAATGATTGGCAAAGCAGTCAATGAACCACCGCCA 230509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192529060897160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |