Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq69 315 6e-81 >seq69 Length=709337 Score = 315 bits (348), Expect = 6e-81 Identities = 616/897 (69%), Gaps = 25/897 (3%) Strand=Plus/Minus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| |||||| || || || |||| |||||| |||||||| || || || | || Sbjct 558782 AACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAA 558723 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366 ||||| ||||||||||||||||| |||||||| | |||||| ||||| | | Sbjct 558722 GGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTTTTATTACCCAA 558663 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || | |||| ||||| |||||||| | ||| || | ||| | || || || || Sbjct 558662 AGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATTCAT 558603 Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486 || | ||| || || |||| || | || || || |||| ||| || || ||||| Sbjct 558602 ACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTC 558543 Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGA--TGGTTTATTTACTAAGTATCCAAACAAT 4544 || || || ||||| | |||||| || |||| ||| | ||| | |||| ||| Sbjct 558542 AGTAATAAT-TCTTTCA-ACGATCTTTGGATCTGGTCTATGTTGTAAATGAGCAAATAAT 558485 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||| || |||||| || ||||||||||| | | ||| | |||||| || || ||| Sbjct 558484 AAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTT 558425 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 ||||| ||||| |||||||| || || | ||| || |||| |||||||| ||| || Sbjct 558424 AATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAA 558365 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG--T 4722 || || ||||| || || || || || || |||| | ||| | || || | | Sbjct 558364 AAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAA--TGCCTCGGAAT 558307 Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 ||| |||||| | | ||||| | ||| || || |||| |||||| || | |||| Sbjct 558306 CTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCAATAG 558247 Query 4783 CGTTAAATAA----TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGG 4838 | || ||||| | ||| ||| ||| || | || ||||| || || | || Sbjct 558246 CATTGAATAAAAAGTCAGCTTCTTT----TGGATCCTTGATGTAAGTTTCAATCAATAAC 558191 Query 4839 CTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCT 4898 || |||| || || || ||||| || ||| || |||||||| || || ||||| Sbjct 558190 GAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCT 558131 Query 4899 TCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCA 4958 |||| | ||||||||| |||| |||| || |||||||| || || ||||| || Sbjct 558130 TCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCG 558071 Query 4959 CTGGCTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTCGTCA-GGCTTAAGT 5015 || ||||| || ||||| | | | | |||||| | |||| | | | |||| | Sbjct 558070 GATGCGGCAAAGAAAGCCAAGATTCTTCCG--ATAAAGAAACGTTCATTATCGTTTAATT 558013 Query 5016 TT--TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACG 5073 || | |||| | | | ||||||| |||||| | ||||||| | ||||| || || | Sbjct 558012 TTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAG 557953 Query 5074 CTTCCGCTTTTTTGTACATAGACCAAATATCAGGATA-CTGAATCGGAAGTATGACA 5129 | || || || |||||||| ||| || ||| | || ||| || |||| |||||| Sbjct 557952 CCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTG-ATTGGAAACATGACA 557897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048871346620