Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq69 315 6e-81
>seq69
Length=709337
Score = 315 bits (348), Expect = 6e-81
Identities = 616/897 (69%), Gaps = 25/897 (3%)
Strand=Plus/Minus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
||||||| |||||| || || || |||| |||||| |||||||| || || || | ||
Sbjct 558782 AACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCAGCCAA 558723
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366
||||| ||||||||||||||||| |||||||| | |||||| ||||| | |
Sbjct 558722 GGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTTTTATTACCCAA 558663
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
||| || | |||| ||||| |||||||| | ||| || | ||| | || || || ||
Sbjct 558662 AGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAATTCAT 558603
Query 4427 TCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTC 4486
|| | ||| || || |||| || | || || || |||| ||| || || |||||
Sbjct 558602 ACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACAGCTTC 558543
Query 4487 TGTGATTATATCTTTTATTTTATCTTTAGA--TGGTTTATTTACTAAGTATCCAAACAAT 4544
|| || || ||||| | |||||| || |||| ||| | ||| | |||| |||
Sbjct 558542 AGTAATAAT-TCTTTCA-ACGATCTTTGGATCTGGTCTATGTTGTAAATGAGCAAATAAT 558485
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
||||| || |||||| || ||||||||||| | | ||| | |||||| || || |||
Sbjct 558484 AAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAGAAAGTT 558425
Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664
||||| ||||| |||||||| || || | ||| || |||| |||||||| ||| ||
Sbjct 558424 AATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCACTGAAA 558365
Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTG--T 4722
|| || ||||| || || || || || || |||| | ||| | || || | |
Sbjct 558364 AAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAA--TGCCTCGGAAT 558307
Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782
||| |||||| | | ||||| | ||| || || |||| |||||| || | ||||
Sbjct 558306 CTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCAATAG 558247
Query 4783 CGTTAAATAA----TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGG 4838
| || ||||| | ||| ||| ||| || | || ||||| || || | ||
Sbjct 558246 CATTGAATAAAAAGTCAGCTTCTTT----TGGATCCTTGATGTAAGTTTCAATCAATAAC 558191
Query 4839 CTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCT 4898
|| |||| || || || ||||| || ||| || |||||||| || || |||||
Sbjct 558190 GAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGCT 558131
Query 4899 TCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCA 4958
|||| | ||||||||| |||| |||| || |||||||| || || ||||| ||
Sbjct 558130 TCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCG 558071
Query 4959 CTGGCTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGTTCGTCA-GGCTTAAGT 5015
|| ||||| || ||||| | | | | |||||| | |||| | | | |||| |
Sbjct 558070 GATGCGGCAAAGAAAGCCAAGATTCTTCCG--ATAAAGAAACGTTCATTATCGTTTAATT 558013
Query 5016 TT--TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACG 5073
|| | |||| | | | ||||||| |||||| | ||||||| | ||||| || || |
Sbjct 558012 TTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGAAG 557953
Query 5074 CTTCCGCTTTTTTGTACATAGACCAAATATCAGGATA-CTGAATCGGAAGTATGACA 5129
| || || || |||||||| ||| || ||| | || ||| || |||| ||||||
Sbjct 557952 CCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTG-ATTGGAAACATGACA 557897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427048871346620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |