Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq69 443 3e-119 >seq69 Length=709337 Score = 443 bits (490), Expect = 3e-119 Identities = 1214/1841 (66%), Gaps = 33/1841 (2%) Strand=Plus/Plus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 ||||| | || || ||||| | || ||| |||| || ||| | | ||||||||||||| Sbjct 432625 TTATCAATAGTGAATTGAATAGCAGCAGAGGCGGCTTGTGTTCTCAAATAGTACATACCA 432684 Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892 || |||| || ||||||| || || ||||| ||||||| ||| | || Sbjct 432685 GTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGG 432744 Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952 || |||||||| || | || || |||||| ||||| ||| | ||||||| ||| Sbjct 432745 TCCTTGATATGAATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCC 432804 Query 76953 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 77012 || | ||||| |||||||| |||||||| | || ||| | | | ||| || ||| Sbjct 432805 ATATCGATAATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCA 432864 Query 77013 TCTGGAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATA 77069 || || | ||||| | ||| ||||||||| | ||| ||||| || |||| ||| Sbjct 432865 TCGGGGATGTTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATA 432924 Query 77070 TCATCATTCCACAATTTCCTC-TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTG 77128 |||| ||||| ||| || || ||| | | | | | |||||||| ||||| Sbjct 432925 GCATCGTTCCA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTG 432983 Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188 ||||| |||| ||| ||||| | | ||| || || || |||||||| | | |||| Sbjct 432984 GAATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTC 433043 Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATT 77248 |||||| ||||||||||| | || ||||| |||||||| || |||||||| ||| || Sbjct 433044 ATTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTT 433103 Query 77249 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGG 77308 ||| | ||||||| | | ||| | ||| | | | ||||||||| | |||| ||| Sbjct 433104 TCTCATACCATGTTTGGCAAGTTTTTGTTTCAATTCATCCCAATCCCATAATTCTGTAGG 433163 Query 77309 TACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGT 77368 ||||| | || ||||||| | || | || |||||| | || || Sbjct 433164 CTTTCTGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGT 433223 Query 77369 TTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAAT 77428 ||||||||| |||||| || || | |||| | ||||| | || ||| ||| || Sbjct 433224 TTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGAT 433283 Query 77429 TGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAA-CGGATAATGTA 77487 ||||||||||| | | || | ||| ||||| ||| || | ||| | || Sbjct 433284 AGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCT-TA 433342 Query 77488 AAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 77547 ||| || |||||||| || || || || ||||| | |||| ||||| |||||| | | Sbjct 433343 AAACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGT 433402 Query 77548 TGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTC 77607 | || | | |||||| || | || |||||||| ||||||| | | | || | || | Sbjct 433403 TAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTAC 433462 Query 77608 TAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAAT-----CAAA----TCTTCCAT 77658 | ||| ||||| || || | | || ||| | ||| | | |||| Sbjct 433463 GAGTAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCAT 433522 Query 77659 CTAT---AACAAAC-ATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT-T 77713 || || |||| | | | ||||| || ||||| | ||||| || || || || | | Sbjct 433523 CTTGTTCAATAAACGAAGGT-AAAGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCT 433581 Query 77714 AGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATT 77773 | | || |||| | || || ||| | || | |||||||| | || | ||| Sbjct 433582 GGAGCTGAG-TATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATT 433640 Query 77774 TTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTC 77833 | ||||||| ||| | || || | |||||||| | || || || || || ||||| Sbjct 433641 CTTTTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTC 433700 Query 77834 AATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGTAT 77891 | || | ||| | || || | ||| | ||| | ||| || || | ||| || Sbjct 433701 GGTTTGAGCTTCCAAGATGGAGTACCACA--ACTTTTGAGCCTTGATGGTT--TTTCTAC 433756 Query 77892 CGCCTC--TCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCAT 77949 | | | || |||||||||| || | | |||| || || || || ||| Sbjct 433757 CACGACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCAG 433816 Query 77950 CCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTT 78009 ||||||| || ||||||||| | | ||||| ||| ||||||| || | ||||| | Sbjct 433817 CCAATCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCT 433876 Query 78010 TCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCAT 78069 ||||||| | ||| || ||||| | || |||| ||||| | ||| |||||| | Sbjct 433877 TCATAAACAAATCTGGGATCCACAAGGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCT 433936 Query 78070 TTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 78129 | || |||||| | | || | || || | |||||| ||||||||||| |||| Sbjct 433937 TACCGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGAT 433996 Query 78130 ATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTAT 78189 | | || | | | || |||| || ||||| || ||||| | ||| | ||| ||||| | Sbjct 433997 ACAAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGT 434056 Query 78190 TATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAAC 78249 | |||| | | ||| || |||||||| ||||| || || ||||| |||| ||||||| Sbjct 434057 TGAAAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAG 434116 Query 78250 TTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTA 78309 ||| | | ||||| ||| |||| | || || || || || |||| || |||| Sbjct 434117 CACCAGTGGAACGAATGTTATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTA 434176 Query 78310 GAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA-TGTTAAGA 78368 ||| ||| || || || || || ||||| || ||| || || ||| || | | Sbjct 434177 AAGCACAAGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCA 434236 Query 78369 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428 ||||| || | |||||||| | | ||| || ||||||||||| ||||| || Sbjct 434237 AGAAACAAGAT-GACATTTGTGGTTTTGGAGTACCAGCATTAAATAAACAAGGAGAACCA 434295 Query 78429 TGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCAT 78488 || ||||| || ||| || | | || || |||||||| || | || |||| | Sbjct 434296 TGGGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCCCTT 434355 Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548 ||| || || | || || | ||| | || ||| || ||||||||| | ||| | Sbjct 434356 CCATGTATACCGATAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAGCTACTTTACCA 434415 Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACC 78589 || || ||||| |||||| |||| |||||||| ||||| Sbjct 434416 TTGATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACC 434456 Score = 251 bits (278), Expect = 1e-61 Identities = 608/904 (67%), Gaps = 21/904 (2%) Strand=Plus/Minus Query 47829 TCTTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTT 47888 ||||| | |||||| || ||||||||| ||| || | || || || ||||| || Sbjct 558792 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 558734 Query 47889 TTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAttttt 47948 || || |||| || || |||||||||||||||||||||||| |||| |||| |||| Sbjct 558733 TTCCCAGCCAAGGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTT 558674 Query 47949 ttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATT 48008 ||| || || | | | |||||| ||||| ||||| | |||| ||| | | Sbjct 558673 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAAT 558614 Query 48009 TCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATA 48068 | ||||||||| || | | ||||||||| ||| || |||| || |||| ||| || Sbjct 558613 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 558554 Query 48069 GTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACT-TGGTGGATACAACAAATG 48127 ||||| || | || || | | | || | | | |||| || ||||| Sbjct 558553 TCAACAGCTTC-AGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATG 558495 Query 48128 TTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTT 48187 ||| | ||||||||| |||||| || | |||||| || | || |||||||||||| Sbjct 558494 AGCAAATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTT 558435 Query 48188 AGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGA 48247 || || || | || ||||| | || | ||| || | ||| || || | || || || Sbjct 558434 GGAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGA 558375 Query 48248 TCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC 48307 ||| || || || ||||| || || || || || | |||||| | | || Sbjct 558374 ACCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGC 558315 Query 48308 TTCG---TTGTGTATCCACC-GTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTG 48363 ||| | || ||||| | | || ||||||||||||||||| || | || || | Sbjct 558314 CTCGGAATCTTGGATCCATCTGATG-GCCCAATCAGCCTTCTTTTTAATTTGCGGAATGG 558256 Query 48364 TTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTA 48423 |||| |||||||| || | ||||| ||| || ||| || | |||||| || || | Sbjct 558255 TTTCAATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCA 558196 Query 48424 AAAGACTA-TACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACAT 48482 | | || | || |||| |||||||| ||||| || || || |||||||| ||| || Sbjct 558195 ATA-ACGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGAT 558137 Query 48483 CTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATT 48542 | ||||||| || || || || | |||| ||| |||| || ||||| || || Sbjct 558136 TTAGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATA 558077 Query 48543 CCATCACTAGCAGCAAAAAATGCTA--ATACAT--GTTTAATAAA--ATATTTTTCGTTG 48596 ||||| || ||||| || || | || | | | | || ||| | || ||||| Sbjct 558076 CCATCGGATGCGGCAAAGAAAGCCAAGATTCTTCCGATAAAGAAACGTTCATTATCGTT- 558018 Query 48597 GAAGTCAGTTTAT-TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 48655 || | ||| | |||| |||| | |||||| || ||| | ||||||||||||||| Sbjct 558017 TAATT---TTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCA 557961 Query 48656 AAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAAT 48715 ||||| ||||| || || || ||||| | ||| || ||| |||| |||||| || || Sbjct 557960 GAATGAAGCCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACAT 557901 Query 48716 AACA 48719 ||| Sbjct 557900 GACA 557897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667584329600