Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq69 412 5e-110 seq35 86.0 9e-12 >seq69 Length=709337 Score = 412 bits (456), Expect = 5e-110 Identities = 1204/1839 (65%), Gaps = 29/1839 (2%) Strand=Plus/Plus Query 75368 TTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCA 75427 ||||| | ||||| ||||| | || || || | || ||| | | ||||||||||||| Sbjct 432625 TTATCAATAGTGAATTGAATAGCAGCAGAGGCGGCTTGTGTTCTCAAATAGTACATACCA 432684 Query 75428 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGA 75487 || |||| || ||||||| || || ||||| ||||| | ||| | || Sbjct 432685 GTCTTTAATCCTTTCTTCCATCCATAAAAGTGCATACTTGTCAATTTACCCATTGTTGGG 432744 Query 75488 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 75547 || |||||||| || | || || |||||| ||||| ||| | ||||||| ||| Sbjct 432745 TCCTTGATATGAATGTTTAATGATTGTGATTGATCAATGAAGGCTGCCCTATCAGAGGCC 432804 Query 75548 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 75607 || | ||||| |||||||| |||||||| | || ||| | | | ||| || ||| Sbjct 432805 ATATCGATAATATGCTTTTGAGAGATTTCCCACACTGTCTTGTACAATGCTTTAATTTCA 432864 Query 75608 TCTGGAAGATTTGT---ATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATC 75664 || || | |||| | ||| ||||| || | || ||||| || |||| || Sbjct 432865 TCGGGGATGTTTGGCAAAGCTTGGATGGAACCATTGTTTGAAATAATACTACTCTTCATA 432924 Query 75665 TCATCATTCCACAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTG 75723 |||| ||||| ||| | || ||| | | | | | |||||||||||||| Sbjct 432925 GCATCGTTCCA-AATACCCAAATCAACCAAATCCTTCAACAAGTATGGATTAACAATTTG 432983 Query 75724 AAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 75783 ||||| |||| ||| ||||||| | ||| || || || |||||||| | | |||| Sbjct 432984 GAATTCACCAGCCAACACTCTTCTGGAGTAGATGTTCGAAGTGTATGGTTCAAAACATTC 433043 Query 75784 ATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATT 75843 |||||| ||||||||||| | || ||||| || ||||| || |||||||| ||| || Sbjct 433044 ATTGTTACCCAAAATTTGTGATGTGGAAGCGGTTGGCATTGGAGCCACCAACAAAGAGTT 433103 Query 75844 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGG 75903 ||| | ||||||| | | ||| | ||| | | | ||||||||| | |||| || Sbjct 433104 TCTCATACCATGTTTGGCAAGTTTTTGTTTCAATTCATCCCAATCCCATAATTCTGTAGG 433163 Query 75904 TACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGT 75963 ||||| | || ||||||| | || | | || |||||| | || || Sbjct 433164 CTTTCTGTCCCACAAGTCATATTGTAACAAACCTTGGGATGCTGGTGATCCTTGGTAGGT 433223 Query 75964 TTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAAT 76023 ||| |||| || || | || || | ||| | || || | ||| ||| ||| || Sbjct 433224 TTCATAAGGACCTTCTTCTTGTGCCAATTCAATAGAAGCTTCAACAGCAGCGTGATAGAT 433283 Query 76024 TGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAG-GATAATGTA 76082 ||||||||||| | | || | ||| ||||| | ||| || ||| | || Sbjct 433284 AGTTTCGAAAATTTGAATGTTTAATTCTCTAGCTTCTTGGGAATCGAATCCGATTCT-TA 433342 Query 76083 AAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTAT 76142 ||| || || ||||| || | || || ||||| | |||| ||||| |||||| | | Sbjct 433343 AAACCATGAAGGCATCAGCCAAACCTTGGACTCCCAATGCAATTGGTCTGTGTCTCATGT 433402 Query 76143 TGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC 76202 | || | |||||||| || | ||||||||||| | ||||| | | | || | || | Sbjct 433403 TAGATTTCTCAGCTTCAGGGACTGGGTAATAATTCCTGTCTATGACTCTGTTCAAGTTAC 433462 Query 76203 TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT-----CAAA----TTTTCCAT 76253 ||| ||||| || || | | ||| ||| | ||| ||| |||| Sbjct 433463 GAGTAACAACTTTGGTAACATCATGCAACTTGTCAAAGTTGTACCAAGCGTGTTTACCAT 433522 Query 76254 CTA--TCAC-AAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310 || ||| |||| | | ||| || ||||| | ||||| || || || || | | Sbjct 433523 CTTGTTCAATAAACGAAGGTAAAGCAATCGATGCCAAGTTACAGACAGCAACTTCGTCTG 433582 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 | | |||| | || || || | || | | |||||| | || | ||| | Sbjct 433583 GAGCTGAGTATTCGACAATTTCACAACACAAGTTGGAAGATTTGATAATACCTAAATTCT 433642 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430 ||||||| ||| ||||||| | |||||||| | | || || || |||||||| Sbjct 433643 TTTGGTTGGACTTGGTGTTACAAGCATCCTTATACAACATGAATGGGGTACCAGTTTCGG 433702 Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTATCG 76488 | || | ||| | || || | ||| | ||| | ||| || || | ||| || | Sbjct 433703 TTTGAGCTTCCAAGATGGAGTACCACA--ACTTTTGAGCCTTGATGGTT--TTTCTACCA 433758 Query 76489 CTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546 | | || |||||||||| | || ||| |||| || || || || ||| || Sbjct 433759 CGACCTTCCCTTTCATATTTTTCGTACAACTCAACAAACTCGTCACCATAAGTGTCAGCC 433818 Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606 || || ||| |||||| ||| | | ||||| ||||||||||| || | ||| | ||| Sbjct 433819 AATCCTGGAGCTTCATTTGGAGAGAACAATGTCCACTCACCATTTTGTTCAACTCTCTTC 433878 Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666 ||||| | ||| || ||||| | || |||| ||||| | ||| |||||| || Sbjct 433879 ATAAACAAATCTGGGATCCACAAGGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTTA 433938 Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726 || |||||| | | || | ||| || | |||||| ||||||||||| ||||| Sbjct 433939 CCGTGGTTCTTTCTGATCTCAATGAAATCAAAGATATCACTGTGCCATGGTTCAAGATAC 433998 Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786 | || | | |||| |||| || ||||| || ||||| | ||| | ||||||||| || Sbjct 433999 AAAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCAACATAACGGGCAGTGTTGTTG 434058 Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846 |||| | | ||| || ||||| || ||||| ||||| ||||| |||| ||||||| Sbjct 434059 AAAACACGAACCATAGGGATAATACCATTAGAAGTACCGTTTGTACCAGCAATATAAGCA 434118 Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906 ||| | |||||| ||| ||| | || || || || || | || || |||| | Sbjct 434119 CCAGTGGAACGAATGTTATGAATGTGCAAACCAATACCACCAGCACTCTTTGAAATTAAA 434178 Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCA-TGTTAAGAAG 76965 ||||| || || |||||||| || || || ||| ||| || ||| || | ||| Sbjct 434179 GCACAAGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAG 434238 Query 76966 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025 ||| || | |||||||| | | ||| || |||||||| || |||||| |||| Sbjct 434239 AAACAAGAT-GACATTTGTGGTTTTGGAGTACCAGCATTAAATAAACAAGGAGAACCATG 434297 Query 77026 AGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTG 77085 || || || ||| || | | || || |||||||| ||| | ||||||| | Sbjct 434298 GGTAAAGTATCTTTGCGACATCAAGTTATAAGTTTCAATGACTCTTGGGATATCCCTTCC 434357 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATT 77145 ||| || || | ||| || | ||| | || ||| || |||| ||| | ||| ||| Sbjct 434358 ATGTATACCGATAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAGCTACTTTACCATT 434417 Query 77146 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACC 77184 || ||||| |||||| |||| |||||||| ||||| Sbjct 434418 GATACGTAACAAATATGATCTTTCTAAAGTTTTGAAACC 434456 Score = 259 bits (286), Expect = 7e-64 Identities = 603/901 (67%), Gaps = 15/901 (2%) Strand=Plus/Minus Query 46318 TCTTGTGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTT 46377 ||||| | |||||| || |||||| || ||| || | || || || ||||| || Sbjct 558792 TCTTG-GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTC 558734 Query 46378 TTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAttttt 46437 || || |||| || || ||||||||||||||||| |||||||| ||||| |||| |||| Sbjct 558733 TTCCCAGCCAAGGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTT 558674 Query 46438 ttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATT 46497 ||| || || | | | |||||| ||||| ||||| | ||| ||| | | Sbjct 558673 TTATTACCCAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAAT 558614 Query 46498 TCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATA 46557 | ||||||||| || | | | || |||| ||| || |||| || |||| |||||| Sbjct 558613 TTACAATTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATT 558554 Query 46558 GTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGT 46617 ||||| || | || || | || | | | |||| ||| ||||| Sbjct 558553 TCAACAGCTTCAGTAATAATTCTTTCAACGATCTTTGGATCTGGTCTATGTTGTAAATGA 558494 Query 46618 TTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTA 46677 ||| | ||||||||| |||||| || | ||||| || | || |||||||||||| Sbjct 558493 GCAAATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTG 558434 Query 46678 GAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGAT 46737 || || || | || ||||| | || | || || | ||| || |||| || || || Sbjct 558433 GAGAAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAA 558374 Query 46738 CCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCA 46797 ||| || || || ||||| ||||| ||||| || || | |||||| | | || Sbjct 558373 CCACTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCC 558314 Query 46798 TC---ATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTT 46854 || || || ||||| || |||||||||||||| || || | || || ||| Sbjct 558313 TCGGAATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTT 558254 Query 46855 TCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAA 46914 || |||||||| || | ||||| ||| | ||| || | || || || || || Sbjct 558253 TCAATAGCATTGAATAAAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCAAT 558194 Query 46915 AGACTA-TACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCT 46973 | || | || ||||||| ||||||||||| || || || |||||||| ||| || | Sbjct 558193 A-ACGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTT 558135 Query 46974 TGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCC 47033 ||||| | ||| || || || | |||| ||| ||| || ||||| || || || Sbjct 558134 AGCTTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACC 558075 Query 47034 ATCACTAGCAGCAAAAAATGCCAATACATGTT----TAATAAAATATTTTTCATCGGTAG 47089 ||| || ||||| || ||||| | | || ||| ||| || | |||| | Sbjct 558074 ATCGGATGCGGCAAAGAAAGCCAAGA-TTCTTCCGATAAAGAAACGTTCATTATCGTT-- 558018 Query 47090 TCAGTTT--ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAA 47147 | | ||| |||| |||| | |||||| || ||| | |||||||||||||||||| Sbjct 558017 TAATTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAA 557958 Query 47148 TGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAAC 47207 ||| ||||| || || || ||||| | ||| || ||| | ||| ||| ||||| || || Sbjct 557957 TGAAGCCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGAC 557898 Query 47208 A 47208 | Sbjct 557897 A 557897 >seq35 Length=214301 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 75713 TTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGT 75772 || || | ||| || || ||||| | ||||| || ||||| | ||| ||||| ||| Sbjct 165839 TTCACCACTTGGAACTCGCCAGATATTACTCGACGTGTGTATAAATTGGACGTATACGGT 165780 Query 75773 TCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACC 75832 || | | |||||||| ||||||||| |||| ||||||||||| ||||| ||||| | | Sbjct 165779 TCAAAACATTCATTGAATCCCAAAATCTGAGATGTTGAAGCAGTAGGCATGGGTGCTATC 165720 Query 75833 AA 75834 || Sbjct 165719 AA 165718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933152364800