Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq54 116 9e-21 seq41 89.7 1e-12 >seq54 Length=356724 Score = 116 bits (128), Expect = 9e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || ||||| |||||||| |||| ||| ||||| |||||||| | Sbjct 21867 CAAG-TGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCCATCTTCCA 21809 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || || ||||| | || || || || | | |||||||||||| ||||| | Sbjct 21808 ATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGGA 21749 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| | || | | |||| || ||| ||||| | ||| || ||||| | Sbjct 21748 TCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGATGGTTTTAC 21689 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||| || || || ||||| | |||||||| Sbjct 21688 CCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658 >seq41 Length=287713 Score = 89.7 bits (98), Expect = 1e-12 Identities = 146/209 (70%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | |||||| ||||||||||||||||| || | || |||||| || ||||||| Sbjct 13245 CAAG-TGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCTA 13187 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || || ||||| | || || ||||| | | || ||||| || || || | Sbjct 13186 ATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCCTGGA 13127 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| ||| || ||||| | || || || || | Sbjct 13126 TCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATGGTCTTAC 13067 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || | ||| || ||||| | |||||| Sbjct 13066 CGGTTAAAGTTTTGACGAAAATTTGCATT 13038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818730333940