Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq54 116 9e-21
seq41 89.7 1e-12
>seq54
Length=356724
Score = 116 bits (128), Expect = 9e-21
Identities = 153/211 (73%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | ||| || || ||||| |||||||| |||| ||| ||||| |||||||| |
Sbjct 21867 CAAG-TGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCCATCTTCCA 21809
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
||| || || ||||| | || || || || | | |||||||||||| ||||| |
Sbjct 21808 ATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGGA 21749
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||| ||| | || | | |||| || ||| ||||| | ||| || ||||| |
Sbjct 21748 TCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGATGGTTTTAC 21689
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|||| || || || ||||| | ||||||||
Sbjct 21688 CCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658
>seq41
Length=287713
Score = 89.7 bits (98), Expect = 1e-12
Identities = 146/209 (70%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | |||||| ||||||||||||||||| || | || |||||| || |||||||
Sbjct 13245 CAAG-TGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCTA 13187
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
||| || || ||||| | || || ||||| | | || ||||| || || || |
Sbjct 13186 ATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCCTGGA 13127
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | |||| ||| || ||||| | || || || || |
Sbjct 13126 TCTTAGACTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATGGTCTTAC 13067
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105
| || | ||| || ||||| | ||||||
Sbjct 13066 CGGTTAAAGTTTTGACGAAAATTTGCATT 13038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818730333940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |