Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq41 165 2e-35
seq54 140 7e-28
seq15 93.3 9e-14
>seq41
Length=287713
Score = 165 bits (182), Expect = 2e-35
Identities = 157/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||||||||||||||||||||||| || || | || || |||| |||||| || |||||
Sbjct 13230 TTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAA 13171
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||||||| |||||||| || ||||| |||||||| | || || |
Sbjct 13170 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCCTGGATCTTAGACTTGACATT 13111
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||| ||||| | ||||| |||||||| || ||||| || ||
Sbjct 13110 GTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGAC 13051
Query 283088 GAATATCTGCATTTTCATATA 283108
||| || |||||| | || ||
Sbjct 13050 GAAAATTTGCATTGTGATTTA 13030
>seq54
Length=356724
Score = 140 bits (154), Expect = 7e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||| ||||| ||||||||||| | | || | ||||| ||
Sbjct 21869 ACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCCATCTTCC 21810
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || ||||||||||| | |||||| || || || || ||||||||||||
Sbjct 21809 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGG 21750
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| || | || || ||||| || | || ||||| | |||||| || |||
Sbjct 21749 ATCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGATGGTTTTA 21690
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||||| | || |||||||| || ||||||||
Sbjct 21689 CCCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658
>seq15
Length=103400
Score = 93.3 bits (102), Expect = 9e-14
Identities = 121/166 (73%), Gaps = 6/166 (4%)
Strand=Plus/Plus
Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088
||||| ||||| | |||||||| |||| || ||||||| || || || |||||||||
Sbjct 7320 GGGAAACCTTCAACTTGACCGTTGGCAATAGCTCTCATCAAGGTAGATTTACCAGCACCA 7379
Query 317089 TTGGGGCCGCAAAGACCATA---CCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145
|| || || || | |||||| | |||| |||| | | || |||| ||||||
Sbjct 7380 TTTGGACCACACAAACCATATCTTCTGTTTC---TCTTTAATCTGAATTGGGTCTTGTTC 7436
Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACA 317191
| | |||||| ||||||| |||| ||||||||||| | |||||
Sbjct 7437 AACAAGATCTTAGCACCATAAGCCAATGAGAACTCACAGTTACACA 7482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046737322411560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |