Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq41 165 2e-35 seq54 140 7e-28 seq15 93.3 9e-14 >seq41 Length=287713 Score = 165 bits (182), Expect = 2e-35 Identities = 157/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||||||||||||||||| || || | || || |||| |||||| || ||||| Sbjct 13230 TTCTTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCTAATTGTTTACCAGCAAA 13171 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||||||||| |||||||| || ||||| |||||||| | || || | Sbjct 13170 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCCTGGATCTTAGACTTGACATT 13111 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| | ||||| |||||||| || ||||| || || Sbjct 13110 GTCAATAGTGTCGGAAGATTCAACTTCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGAC 13051 Query 283088 GAATATCTGCATTTTCATATA 283108 ||| || |||||| | || || Sbjct 13050 GAAAATTTGCATTGTGATTTA 13030 >seq54 Length=356724 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || || ||| ||| ||||| ||||||||||| | | || | ||||| || Sbjct 21869 ACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAGGTTCTTCCATCTTCC 21810 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || ||||||||||| | |||||| || || || || |||||||||||| Sbjct 21809 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGG 21750 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | ||| || | || || ||||| || | || ||||| | |||||| || ||| Sbjct 21749 ATCTTGGATTTAACATTGTCAATGGTGTCAGATGACTCAACTTCCAAAGTGATGGTTTTA 21690 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| | || |||||||| || |||||||| Sbjct 21689 CCCGTAAGGGTTTTAACGAAAATTTGCATTTT 21658 >seq15 Length=103400 Score = 93.3 bits (102), Expect = 9e-14 Identities = 121/166 (73%), Gaps = 6/166 (4%) Strand=Plus/Plus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 ||||| ||||| | |||||||| |||| || ||||||| || || || ||||||||| Sbjct 7320 GGGAAACCTTCAACTTGACCGTTGGCAATAGCTCTCATCAAGGTAGATTTACCAGCACCA 7379 Query 317089 TTGGGGCCGCAAAGACCATA---CCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145 || || || || | |||||| | |||| |||| | | || |||| |||||| Sbjct 7380 TTTGGACCACACAAACCATATCTTCTGTTTC---TCTTTAATCTGAATTGGGTCTTGTTC 7436 Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACA 317191 | | |||||| ||||||| |||| ||||||||||| | ||||| Sbjct 7437 AACAAGATCTTAGCACCATAAGCCAATGAGAACTCACAGTTACACA 7482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737322411560