Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq69 300 2e-76 >seq69 Length=709337 Score = 300 bits (332), Expect = 2e-76 Identities = 649/957 (68%), Gaps = 28/957 (3%) Strand=Plus/Minus Query 23154 CATTT--TTTAAAAATCTTCATCTAAAGTGAAT---TTCACTGCTTTAT---CACTATT- 23204 ||||| |||||||||||||||| || | || || | |||||| |||| || Sbjct 558847 CATTTCATTTAAAAATCTTCATCAAATGCAAAAGCGTTGGCATCTTTATTTTCACTCTTG 558788 Query 23205 --CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCC 23262 ||||||||| ||||||||| || ||| | |||| || ||||| ||||| || Sbjct 558787 GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCA 558728 Query 23263 TCTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACAT 23322 | || || || ||||||||||||||||||||||||| ||| || || |||| Sbjct 558727 GCCAAGGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTTTTATTA 558668 Query 23323 GATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAG 23382 || | || | ||||| || |||||||| | |||||||||||| || | | | Sbjct 558667 CCCAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAA 558608 Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA 23442 || ||||| | || | ||||| | |||||| |||||| ||||||||| |||| Sbjct 558607 TTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACA 558548 Query 23443 GCATCTTTAATTATT---TGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTA 23499 || || |||| ||| | ||| || ||| || ||| || || ||||| | Sbjct 558547 GCTTCAGTAATAATTCTTTCAACGAT--CTTTGGATCT-GGTCTATGTTGTAAATGAGCA 558491 Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 || ||||||||||| |||||| |||| ||||| || | || ||| ||||| || || Sbjct 558490 AATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAG 558431 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || |||||||||||||| || |||| ||| || | ||| || || | |||||||| || Sbjct 558430 AAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCA 558371 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 || || ||||| |||||||| || || || || | | | |||| ||| | Sbjct 558370 CTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCG 558311 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739 |||| |||||| | | | ||||| ||||||| ||| | | ||| |||||| Sbjct 558310 GAATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCA 558251 Query 23740 ATTGCTTTTAAGAGAAAAGT-TTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAA 23798 || || || || | |||||| ||||| ||| | || || || ||||| | ||| Sbjct 558250 ATAGCATTGAATA-AAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCAATAA 558192 Query 23799 ACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGC 23858 || |||| || ||||| ||||| || ||| || || || || ||| || |||| Sbjct 558191 CGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGC 558132 Query 23859 TTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATC 23918 ||| | | |||||| ||| |||| ||| | || ||||| |||||||||||||| Sbjct 558131 TTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATC 558072 Query 23919 ACTAGCAGCAAAGAAAG-CAAGAACATATTTTATAAAATGTCTTTCATCA--GTTGATAA 23975 || |||||||||| ||||| | | ||||| | ||||| | ||| ||| Sbjct 558071 GGATGCGGCAAAGAAAGCCAAGATTCT-TCCGATAAAGAAACGTTCATTATCGTT--TAA 558015 Query 23976 TTTTT---TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACT 24032 ||||| ||||||||| || |||||| |||||| | ||| ||| ||||||| || Sbjct 558014 TTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGA 557955 Query 24033 TGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTAC 24089 ||| || ||| |||||| |||| || |||| | | |||||||| || || Sbjct 557954 AGCCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGAC 557898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487087396000