Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq69 300 2e-76
>seq69
Length=709337
Score = 300 bits (332), Expect = 2e-76
Identities = 649/957 (68%), Gaps = 28/957 (3%)
Strand=Plus/Minus
Query 23154 CATTT--TTTAAAAATCTTCATCTAAAGTGAAT---TTCACTGCTTTAT---CACTATT- 23204
||||| |||||||||||||||| || | || || | |||||| |||| ||
Sbjct 558847 CATTTCATTTAAAAATCTTCATCAAATGCAAAAGCGTTGGCATCTTTATTTTCACTCTTG 558788
Query 23205 --CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCC 23262
||||||||| ||||||||| || ||| | |||| || ||||| ||||| ||
Sbjct 558787 GCCATAACACCAGCTTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTCCCA 558728
Query 23263 TCTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACAT 23322
| || || || ||||||||||||||||||||||||| ||| || || ||||
Sbjct 558727 GCCAAGGAAATGTTTTCCATAAAATCAAATGGATTAGTGACATTGTAAACTTTTTTATTA 558668
Query 23323 GATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAG 23382
|| | || | ||||| || |||||||| | |||||||||||| || | | |
Sbjct 558667 CCCAAAGCAACCAATAATCTATCAGCAACAAATTCGACATATTGACACATTAATTTACAA 558608
Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA 23442
|| ||||| | || | ||||| | |||||| |||||| ||||||||| ||||
Sbjct 558607 TTCATACCCAATAAACTAACTGGTAAAGCATCAGTAAAGAATTCTTTTTCAATTTCAACA 558548
Query 23443 GCATCTTTAATTATT---TGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTA 23499
|| || |||| ||| | ||| || ||| || ||| || || ||||| |
Sbjct 558547 GCTTCAGTAATAATTCTTTCAACGAT--CTTTGGATCT-GGTCTATGTTGTAAATGAGCA 558491
Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559
|| ||||||||||| |||||| |||| ||||| || | || ||| ||||| || ||
Sbjct 558490 AATAATAAACATGCGAAATCAGTGTGTAAACCTTCGTCACGACAAATTAATTCGTTGGAG 558431
Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619
|| |||||||||||||| || |||| ||| || | ||| || || | |||||||| ||
Sbjct 558430 AAAGTTAATCCTGGCATCAAACCTCTTTTCTTCAACCAGAAAATAGATGCAAATGAACCA 558371
Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679
|| || ||||| |||||||| || || || || | | | |||| ||| |
Sbjct 558370 CTGAAAAAGATACCTTCAACAGCAGCGAAAGCAACCAATCTCTCAGCAAACAATGCCTCG 558311
Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739
|||| |||||| | | | ||||| ||||||| ||| | | ||| ||||||
Sbjct 558310 GAATCTTGGATCCATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGCGGAATGGTTTCA 558251
Query 23740 ATTGCTTTTAAGAGAAAAGT-TTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAA 23798
|| || || || | |||||| ||||| ||| | || || || ||||| | |||
Sbjct 558250 ATAGCATTGAATA-AAAAGTCAGCTTCTTTTGGATCCTTGATGTAAGTTTCAATCAATAA 558192
Query 23799 ACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGC 23858
|| |||| || ||||| ||||| || ||| || || || || ||| || ||||
Sbjct 558191 CGAGTAAGTTTCTGAGTGAATGTTTTCCATCATAATTTGGAATCCGTAGAAAGATTTAGC 558132
Query 23859 TTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATC 23918
||| | | |||||| ||| |||| ||| | || ||||| ||||||||||||||
Sbjct 558131 TTCTGGAATTTGAACTTCAGCTGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATC 558072
Query 23919 ACTAGCAGCAAAGAAAG-CAAGAACATATTTTATAAAATGTCTTTCATCA--GTTGATAA 23975
|| |||||||||| ||||| | | ||||| | ||||| | ||| |||
Sbjct 558071 GGATGCGGCAAAGAAAGCCAAGATTCT-TCCGATAAAGAAACGTTCATTATCGTT--TAA 558015
Query 23976 TTTTT---TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACT 24032
||||| ||||||||| || |||||| |||||| | ||| ||| ||||||| ||
Sbjct 558014 TTTTTCTCTCCAATCATGAAGATCTTTACCTAAATCGATTTCTTCAGCTGTCCAGAATGA 557955
Query 24033 TGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTAC 24089
||| || ||| |||||| |||| || |||| | | |||||||| || ||
Sbjct 557954 AGCCTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATCTGATTGGAAACATGAC 557898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487087396000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |