Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq54 105 5e-18 seq41 100 2e-16 >seq54 Length=356724 Score = 105 bits (116), Expect = 5e-18 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| |||| ||| | ||| |||||||| |||||||| |||| Sbjct 21887 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAT 21828 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | || || | || |||| || || || ||||||||||| | || ||||||| || Sbjct 21827 AA--GGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAG 21770 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCC 44287 | | |||||||| || ||||| | || || || | |||||||| | || || Sbjct 21769 GGATTCCTTCCTTGTCTTGGATCTT-GGATTTAACATTGTCAATGGTGTCAGATGACTCA 21711 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| || || || || ||||| ||||| || ||||| |||||||| Sbjct 21710 ACTTCCAAAGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCAT 21661 >seq41 Length=287713 Score = 100 bits (110), Expect = 2e-16 Identities = 168/238 (71%), Gaps = 10/238 (4%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169 || ||||||| ||||||||||| ||| | || || |||||||||||||| || | Sbjct 13265 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAT 13206 Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||||| | |||| || | || || || ||||||||||| | || || |||| | Sbjct 13205 AGAGTT--CTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 13148 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | |||||| || ||| ||||| ||| || ||| | || ||||||| ||||| Sbjct 13147 GAATACCTTCTTTGTCCTGGATCTTAGACTTGACATTGT--CAATAGTGTCGGAAGATTC 13090 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGA 44344 || |||| || || ||||| || || | || || ||||| |||||||| ||||| Sbjct 13089 AACTTCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCAT--TGTGA 13034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989785766380