Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq54 105 5e-18
seq41 100 2e-16
>seq54
Length=356724
Score = 105 bits (116), Expect = 5e-18
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| |||||| |||| ||| | ||| |||||||| |||||||| ||||
Sbjct 21887 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAT 21828
Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| || || | || |||| || || || ||||||||||| | || ||||||| ||
Sbjct 21827 AA--GGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAG 21770
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCC 44287
| | |||||||| || ||||| | || || || | |||||||| | || ||
Sbjct 21769 GGATTCCTTCCTTGTCTTGGATCTT-GGATTTAACATTGTCAATGGTGTCAGATGACTCA 21711
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||| || || || || ||||| ||||| || ||||| ||||||||
Sbjct 21710 ACTTCCAAAGTGATGGTTTTACCCGTAAGGGTTTTAACGAAAATTTGCAT 21661
>seq41
Length=287713
Score = 100 bits (110), Expect = 2e-16
Identities = 168/238 (71%), Gaps = 10/238 (4%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169
|| ||||||| ||||||||||| ||| | || || |||||||||||||| || |
Sbjct 13265 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAT 13206
Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
||||| | |||| || | || || || ||||||||||| | || || |||| |
Sbjct 13205 AGAGTT--CTACCGTCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 13148
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | |||||| || ||| ||||| ||| || ||| | || ||||||| |||||
Sbjct 13147 GAATACCTTCTTTGTCCTGGATCTTAGACTTGACATTGT--CAATAGTGTCGGAAGATTC 13090
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGA 44344
|| |||| || || ||||| || || | || || ||||| |||||||| |||||
Sbjct 13089 AACTTCCAAGGTGATGGTCTTACCGGTTAAAGTTTTGACGAAAATTTGCAT--TGTGA 13034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989785766380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |