Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq39 98.7 1e-15
seq60 89.7 7e-13
>seq39
Length=58077
Score = 98.7 bits (108), Expect = 1e-15
Identities = 211/312 (68%), Gaps = 14/312 (4%)
Strand=Plus/Minus
Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771
|||||||| || || |||||||| ||| ||||| || || || || ||||| |
Sbjct 17219 TTATCCTGCTTATTATACCAAAGATCGTGTGACATGGGATTGGGTGTCCCATTCAATATT 17160
Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAA 50831
|| || || || ||| | || | |||| || || | || |||||| | |||||
Sbjct 17159 GCATCCTATGCATTACTTACCAAGATGATTGCACATGTGGTAGATATGGACTGTGGAGAG 17100
Query 50832 TTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAG 50891
||||||||||| |||| || |||||| | ||| | ||||| | ||||| || ||||||
Sbjct 17099 TTTATTCATACCCTAGGTGATGCTCATGTGTACTTAGATCATATTGATGCATTGAAGGAG 17040
Query 50892 CAATTGACTCGAACGGTAAAGCCGGCGCCGATTTTAATT-TTAAAGAA---AAAATCGAT 50947
||| |||| ||| ||| | || | || || |||||||| | || ||
Sbjct 17039 CAAATGACGAGAATTCCAAAACAATTCCCTAAATTGGTTATTAAAGAAGGTAGAAAAGAG 16980
Query 50948 CGAACTAAGA--------GATTTTAAATTTGAAGATTTCG-AATTGTTGGATTACGATCC 50998
| ||| | |||||||| ||||||||||| | |||||||||| || || ||
Sbjct 16979 GAGATTAAAAGCATTGATGATTTTAAGTTTGAAGATTTTGAAATTGTTGGA-TATGAACC 16921
Query 50999 TCATCCTTCTAT 51010
||||||| ||
Sbjct 16920 GTATCCTTCGAT 16909
>seq60
Length=402545
Score = 89.7 bits (98), Expect = 7e-13
Identities = 130/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 63718 GTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTT 63777
||||| ||| | | ||| | | ||| | || | || ||||| |||||||| |||
Sbjct 169879 GTTAAGGTAAGAATGAGAACAACAAAAGTGCCCCAGATTGGTGACAAATTTGCATCTAG- 169821
Query 63778 ACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAA 63836
||| | |||||||||||| |||| | | |||| |||| |||||||||||||| ||
Sbjct 169820 ACATGGTCAAAAAGGTACCATTGGTGTTACTTATAGACATGAAGATATGCCTTTCACAGC 169761
Query 63837 AGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896
|| ||||| || || ||| | ||||||||||||| || | || |||||||| ||
Sbjct 169760 GGAAGGTATTGTTCCTGATTTAATCATCAATCCACATGCGATCCCATCACGTATGACGGT 169701
Query 63897 T 63897
|
Sbjct 169700 T 169700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667074032618400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |