Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19] 140 sequences; 13,271,996 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq39 98.7 1e-15 seq60 89.7 7e-13 >seq39 Length=58077 Score = 98.7 bits (108), Expect = 1e-15 Identities = 211/312 (68%), Gaps = 14/312 (4%) Strand=Plus/Minus Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771 |||||||| || || |||||||| ||| ||||| || || || || ||||| | Sbjct 17219 TTATCCTGCTTATTATACCAAAGATCGTGTGACATGGGATTGGGTGTCCCATTCAATATT 17160 Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAA 50831 || || || || ||| | || | |||| || || | || |||||| | ||||| Sbjct 17159 GCATCCTATGCATTACTTACCAAGATGATTGCACATGTGGTAGATATGGACTGTGGAGAG 17100 Query 50832 TTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAG 50891 ||||||||||| |||| || |||||| | ||| | ||||| | ||||| || |||||| Sbjct 17099 TTTATTCATACCCTAGGTGATGCTCATGTGTACTTAGATCATATTGATGCATTGAAGGAG 17040 Query 50892 CAATTGACTCGAACGGTAAAGCCGGCGCCGATTTTAATT-TTAAAGAA---AAAATCGAT 50947 ||| |||| ||| ||| | || | || || |||||||| | || || Sbjct 17039 CAAATGACGAGAATTCCAAAACAATTCCCTAAATTGGTTATTAAAGAAGGTAGAAAAGAG 16980 Query 50948 CGAACTAAGA--------GATTTTAAATTTGAAGATTTCG-AATTGTTGGATTACGATCC 50998 | ||| | |||||||| ||||||||||| | |||||||||| || || || Sbjct 16979 GAGATTAAAAGCATTGATGATTTTAAGTTTGAAGATTTTGAAATTGTTGGA-TATGAACC 16921 Query 50999 TCATCCTTCTAT 51010 ||||||| || Sbjct 16920 GTATCCTTCGAT 16909 >seq60 Length=402545 Score = 89.7 bits (98), Expect = 7e-13 Identities = 130/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 63718 GTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTT 63777 ||||| ||| | | ||| | | ||| | || | || ||||| |||||||| ||| Sbjct 169879 GTTAAGGTAAGAATGAGAACAACAAAAGTGCCCCAGATTGGTGACAAATTTGCATCTAG- 169821 Query 63778 ACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAA 63836 ||| | |||||||||||| |||| | | |||| |||| |||||||||||||| || Sbjct 169820 ACATGGTCAAAAAGGTACCATTGGTGTTACTTATAGACATGAAGATATGCCTTTCACAGC 169761 Query 63837 AGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896 || ||||| || || ||| | ||||||||||||| || | || |||||||| || Sbjct 169760 GGAAGGTATTGTTCCTGATTTAATCATCAATCCACATGCGATCCCATCACGTATGACGGT 169701 Query 63897 T 63897 | Sbjct 169700 T 169700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667074032618400