Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20orthopsilosis_20[genbank_20GCA_5F900002835.1_202014-02-19]
140 sequences; 13,271,996 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq41 143 6e-29
seq54 140 8e-28
>seq41
Length=287713
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||| | || || || || |||||| | || || ||| || |||
Sbjct 13042 CAAATTTTCGTCAAAACTTTAACCGGTAAGACCATCACCTTGGAAGTTGAATCTTCCGAC 13101
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| |||||||||||||| || || || ||||| |||
Sbjct 13102 ACTATTGACAATGTCAAGTCTAAGATCCAGGACAAAGAAGGTATTCCACCAGACCAACAA 13161
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| | ||||| || || ||||| | || || ||| ||
Sbjct 13162 AGATTGATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACTCTATCTGACTACAACATC 13221
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||||||| || |||| | || |||||| | |||
Sbjct 13222 CAAAAAGAATCTACTTTGCACTTGGTGTTGAGATTGAGA 13260
>seq54
Length=356724
Score = 140 bits (154), Expect = 8e-28
Identities = 168/228 (74%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||||||||| ||||| || || || ||||| ||||| | || || ||
Sbjct 21658 AAAATGC---AAATTTTCGTTAAAACCCTTACGGGTAAAACCATCACTTTGGAAGTTGAG 21714
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| |||||||| || || || ||| ||||| || ||||| ||||||||||||||
Sbjct 21715 TCATCTGACACCATTGACAATGTTAAATCCAAGATCCAAGACAAGGAAGGAATCCCTCCA 21774
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| || ||| || | ||||| || || ||||| | ||||||||||| || | ||||
Sbjct 21775 GATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCTTATCCGAC 21834
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||| | ||||| ||||| || |||| | || |||||| | |||
Sbjct 21835 TACAACATTCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGA 21882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203729040807160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |