Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq4 181 1e-40 >seq4 Length=3023470 Score = 181 bits (200), Expect = 1e-40 Identities = 566/868 (65%), Gaps = 25/868 (3%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||||||||| ||| | |||||| || || || || || || | | || ||||||| Sbjct 2626927 TTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTCT 2626868 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 |||| |||||||| ||||| || | || ||| |||| || |||| | | | Sbjct 2626867 CCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTT--TGTTACCCAAAGCAACCAA 2626810 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 |||||| || || |||||||| | |||||| ||||| || | || |||||||| | | Sbjct 2626809 TAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAA 2626750 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 || || || | || || || || ||| || || || |||| ||||| ||||||| Sbjct 2626749 ACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAAT 2626690 Query 16912 ACTAGCAAC--TCGTTCCTCGGAC-GGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968 || |||| || | | || | ||| |||||| | ||| ||||| || ||||| Sbjct 2626689 TCTTTCAACAATCTT---TGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGC 2626633 Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028 ||||| ||||| || || || | | || | ||| || ||||| ||||| || || Sbjct 2626632 AAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGG 2626573 Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088 ||| ||||| ||||| ||||| || || | || ||||| ||| || || ||||| Sbjct 2626572 CATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACC 2626513 Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148 ||| || | ||||| || | |||| || || || || || | ||||||| Sbjct 2626512 CTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATCCA 2626453 Query 17149 TTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA 17208 | | |||| || || || | || || | || ||||| || || || ||||| Sbjct 2626452 TCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAA 2626393 Query 17209 TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268 || ||||| | | || | ||||| || || || | || || |||| || Sbjct 2626392 GAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTGA 2626333 Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328 || ||||| ||||| || || || || ||||| || |||||| | |||||||| Sbjct 2626332 ATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAAC 2626273 Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388 ||| | | || |||| | | ||||| || || || || || || |||||||| Sbjct 2626272 TTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAAA 2626213 Query 17389 CGCCAATATATGCTT--AATGAAATATTTTTCGTCCGGTGTAA--GAA-----CGCGCCA 17439 |||| | || ||| ||||||| | |||| | ||| | || | | ||| Sbjct 2626212 GGCCA--AGATTCTTCCAATGAAAAACCTTTCAT----TGTCATTCAATTTCTCTCTCCA 2626159 Query 17440 GTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTT 17499 || | | |||||| || ||| | |||||| | ||||| || || | ||||| Sbjct 2626158 ATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTT 2626099 Query 17500 TTTATACATATTCCAAATATCATTGTAT 17527 || ||||| | |||||| |||| |||| Sbjct 2626098 CTTGTACATTTGCCAAATTTCATGGTAT 2626071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545541776120