Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq4 232 7e-56 >seq4 Length=3023470 Score = 232 bits (256), Expect = 7e-56 Identities = 610/922 (66%), Gaps = 27/922 (3%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 ||||||||||| ||| | |||||| ||||| || || || || | || || ||||| | Sbjct 2626927 TTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTCT 2626868 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029 ||||||||||||| ||||| || | || ||| | || | ||||| | | ||| Sbjct 2626867 CCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGT-TACCCAAA----GCAAC 2626813 Query 16030 ---TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT 16086 |||||| || || |||||||| | |||||||||||| || | ||||| ||||| | Sbjct 2626812 CAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAA 2626753 Query 16087 AAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAAT 16146 | | || || | || | || || |||| || ||| || |||| ||||| |||| Sbjct 2626752 CAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAAT 2626693 Query 16147 GATATCGGTGGCTCGTGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACG 16205 || || | | ||| | | ||| |||| | || || ||||| | || | Sbjct 2626692 AAT-TCTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATG 2626634 Query 16206 CGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTG 16265 | || || |||| ||||| || | | || | ||| |||||||| || || |||| Sbjct 2626633 CAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTG 2626574 Query 16266 GCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATAC 16325 ||||| ||||| ||||| |||||||| || | |||||| || || || || |||| Sbjct 2626573 GCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATAC 2626514 Query 16326 CCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCC 16385 ||||||||| |||||||| | |||| || || || ||||| || |||||| Sbjct 2626513 CCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATCC 2626454 Query 16386 ATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445 || | |||| || || || | ||| || | || ||||| || || || || | Sbjct 2626453 ATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATA 2626394 Query 16446 ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTG 16505 | || ||||| ||| | ||||| || ||||||| ||| || |||||| Sbjct 2626393 AGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTG 2626334 Query 16506 AGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTA 16565 | || ||||| || || || || || ||||| || || || || | ||||| | Sbjct 2626333 AATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAA 2626274 Query 16566 CTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAA 16625 |||| | |||| |||| ||| ||| ||||| || ||||| ||| ||||| |||| Sbjct 2626273 CTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAA 2626214 Query 16626 ACGCCAATATGTGCTT--AATGAAATATTTTTCGTCAGATGTAA--GAATAT-----GCC 16676 | ||||| | | ||| ||||||| | |||| | ||| | ||| | || Sbjct 2626213 AGGCCAAGA--TTCTTCCAATGAAAAACCTTTCAT----TGTCATTCAATTTCTCTCTCC 2626160 Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCT 16736 |||| | | |||||| || ||| | |||||||| ||||| || || | |||| Sbjct 2626159 AATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCT 2626100 Query 16737 TTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCTATCTAAGG 16796 | || ||||||| |||||| |||| |||| || ||||| | ||| || | | | | Sbjct 2626099 TCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATAACGACGTTTGT 2626040 Query 16797 ATTCCTTTAACACGGGTTCATC 16818 |||||| || | ||||| || Sbjct 2626039 TTTCCTTCAAAAGTGGTTCTTC 2626018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414342465880