Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq4 232 7e-56
>seq4
Length=3023470
Score = 232 bits (256), Expect = 7e-56
Identities = 610/922 (66%), Gaps = 27/922 (3%)
Strand=Plus/Minus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
||||||||||| ||| | |||||| ||||| || || || || | || || ||||| |
Sbjct 2626927 TTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTCT 2626868
Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029
||||||||||||| ||||| || | || ||| | || | ||||| | | |||
Sbjct 2626867 CCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGT-TACCCAAA----GCAAC 2626813
Query 16030 ---TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT 16086
|||||| || || |||||||| | |||||||||||| || | ||||| ||||| |
Sbjct 2626812 CAATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAA 2626753
Query 16087 AAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAAT 16146
| | || || | || | || || |||| || ||| || |||| ||||| ||||
Sbjct 2626752 CAAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAAT 2626693
Query 16147 GATATCGGTGGCTCGTGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACG 16205
|| || | | ||| | | ||| |||| | || || ||||| | || |
Sbjct 2626692 AAT-TCTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATG 2626634
Query 16206 CGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTG 16265
| || || |||| ||||| || | | || | ||| |||||||| || || ||||
Sbjct 2626633 CAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTG 2626574
Query 16266 GCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATAC 16325
||||| ||||| ||||| |||||||| || | |||||| || || || || ||||
Sbjct 2626573 GCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATAC 2626514
Query 16326 CCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCC 16385
||||||||| |||||||| | |||| || || || ||||| || ||||||
Sbjct 2626513 CCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATCC 2626454
Query 16386 ATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445
|| | |||| || || || | ||| || | || ||||| || || || || |
Sbjct 2626453 ATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATA 2626394
Query 16446 ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTG 16505
| || ||||| ||| | ||||| || ||||||| ||| || ||||||
Sbjct 2626393 AGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTG 2626334
Query 16506 AGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTA 16565
| || ||||| || || || || || ||||| || || || || | ||||| |
Sbjct 2626333 AATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAA 2626274
Query 16566 CTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAA 16625
|||| | |||| |||| ||| ||| ||||| || ||||| ||| ||||| ||||
Sbjct 2626273 CTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAA 2626214
Query 16626 ACGCCAATATGTGCTT--AATGAAATATTTTTCGTCAGATGTAA--GAATAT-----GCC 16676
| ||||| | | ||| ||||||| | |||| | ||| | ||| | ||
Sbjct 2626213 AGGCCAAGA--TTCTTCCAATGAAAAACCTTTCAT----TGTCATTCAATTTCTCTCTCC 2626160
Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCT 16736
|||| | | |||||| || ||| | |||||||| ||||| || || | ||||
Sbjct 2626159 AATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCT 2626100
Query 16737 TTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCTATCTAAGG 16796
| || ||||||| |||||| |||| |||| || ||||| | ||| || | | | |
Sbjct 2626099 TCTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACATAACGACGTTTGT 2626040
Query 16797 ATTCCTTTAACACGGGTTCATC 16818
|||||| || | ||||| ||
Sbjct 2626039 TTTCCTTCAAAAGTGGTTCTTC 2626018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414342465880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |