Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq5 98.7 8e-16
seq3 82.4 6e-11
>seq5
Length=2091826
Score = 98.7 bits (108), Expect = 8e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | ||||| ||||| ||||| || ||||||||||| ||||| | |
Sbjct 2075904 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075963
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | || |||| ||||| || ||| |||| | ||| || || || ||
Sbjct 2075964 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2076023
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||| ||||| |||||| ||| || | | | | ||| || | |||
Sbjct 2076024 ATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAACC 2076083
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180
|| | ||| |||||||| ||||| || |||||||| || ||||||||| |||
Sbjct 2076084 TCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATTGTGA 2076135
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | ||||| ||||| ||||| || ||||||||||| ||||| | |
Sbjct 2075676 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075735
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | || |||| ||||| || ||| |||| | ||| || || || ||
Sbjct 2075736 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2075795
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||| ||||| |||||| ||| || | | | | ||| || | ||
Sbjct 2075796 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACC 2075855
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||| ||||| || |||||||| || ||||||||
Sbjct 2075856 TCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902
>seq3
Length=962442
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || | ||||| |||||||| || |||||||| ||||| ||||| | |
Sbjct 22567 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 22508
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| | || |||| ||||| || ||| | || | ||| || || || ||
Sbjct 22507 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGG 22448
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| || || | | | | || ||| | ||| |
Sbjct 22447 ATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAACT 22388
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|| | || ||||| || || || | ||||||||||| |||||||||
Sbjct 22387 TCTAAAGTGATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCATT 22340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259153683444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |