Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq5 102 7e-17
seq3 91.5 1e-13
>seq5
Length=2091826
Score = 102 bits (112), Expect = 7e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||||||||||||||| | ||| || ||||||||||||||||| |||
Sbjct 2075674 TACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGG 2075733
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| | ||| || | ||||| ||||| | || | | || ||||| || |
Sbjct 2075734 ACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTG 2075793
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || || || |||||| || || ||| || | || | ||||| | || | ||
Sbjct 2075794 GAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGAT-TCA 2075852
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| | ||| | || || ||||||| ||||| || ||||| |||||
Sbjct 2075853 ACCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||||||||||||||| | ||| || ||||||||||||||||| |||
Sbjct 2075902 TACCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGG 2075961
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| | ||| || | ||||| ||||| | || | | || ||||| || |
Sbjct 2075962 ACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTG 2076021
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || || |||||| || || ||| || | || | ||||| | ||| |
Sbjct 2076022 GAATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAA 2076081
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | || || ||||||| ||||| || ||||| |||||
Sbjct 2076082 CCTCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2076130
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580
||||||||||||||||| | ||| || ||||||||||||||||| ||| || ||| |
Sbjct 2075457 AATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTA 2075516
Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640
||| || | ||||| ||||| | || | | || ||||| || || || || ||
Sbjct 2075517 CCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCT 2075576
Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGT 118699
|||||| || || ||| || | || | ||||| | || | || ||||| | |||
Sbjct 2075577 TTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGAT-TCAACCTCTAAGGT 2075635
Query 118700 CACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || || || |||| ||||| || ||||| |||||
Sbjct 2075636 GATGGTCTTACCAGTCAATGTTTTGACGAAAATTTGCAT 2075674
>seq3
Length=962442
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580
||||||||||||||||| | ||||| || ||||| |||||||| ||| || ||| |
Sbjct 22558 AATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTA 22499
Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640
||| || | ||||| ||||| |||| | | || ||||| || || || || |||
Sbjct 22498 CCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATTCCTTCC 22439
Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700
|||||| || || || || | || | |||||| | ||| || || | ||
Sbjct 22438 TTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAACTTCTAAAGTG 22379
Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| || || || ||||| ||||| || |||||
Sbjct 22378 ATGGTTTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 22341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830352414228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |