Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq5 134 2e-26
seq3 116 6e-21
>seq5
Length=2091826
Score = 134 bits (148), Expect = 2e-26
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| ||||| || |||||||| || || || || ||
Sbjct 2075448 CCACCTCTCAATCTCAACACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075507
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| | ||| || |||||||| |||||||||||||||||||| ||||| || |||
Sbjct 2075508 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2075567
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||| ||||| ||| ||||| ||| ||
Sbjct 2075568 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACC 2075627
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| ||||| || ||||| || |||||||| | ||| ||||||||
Sbjct 2075628 TCTAAGGTGATGGTCTTACCAGTCAATGTTTTGACGAAAATTTGCAT 2075674
Score = 129 bits (142), Expect = 9e-25
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || || || |||||||| || || || || ||
Sbjct 2075676 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075735
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| | ||| || |||||||| |||||||||||||||||||| ||||| || |||
Sbjct 2075736 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2075795
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||| ||||| ||| ||||| ||| ||
Sbjct 2075796 ATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCTGATGATTCAACC 2075855
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| ||||| || ||||| || |||||||| | ||| ||||||||
Sbjct 2075856 TCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902
Score = 127 bits (140), Expect = 3e-24
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || || || |||||||| || || || || ||
Sbjct 2075904 CCACCTCTCAATCTCAACACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGAC 2075963
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| | ||| || |||||||| |||||||||||||||||||| ||||| || |||
Sbjct 2075964 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 2076023
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||| ||||| ||| ||||| || ||
Sbjct 2076024 ATACCTTCTTTGTCTTGGATCTTGGATTTGACGTTGTCAATAGTGTCTGATGACTCAACC 2076083
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|||| ||||| || ||||| || |||||||| | ||| |||||||||
Sbjct 2076084 TCTAAGGTGATGGTCTTACCGGTCAATGTTTTGACGAAAATTTGCATT 2076131
>seq3
Length=962442
Score = 116 bits (128), Expect = 6e-21
Identities = 108/137 (79%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || ||||||||||| || || || || || ||
Sbjct 22567 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 22508
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| | ||| || |||||||| |||||||| ||||||||||| ||||| || ||
Sbjct 22507 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGG 22448
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| || |||||
Sbjct 22447 ATTCCTTCCTTGTCTTG 22431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743526316353280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |