Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq5 134 1e-26
seq3 118 8e-22
>seq5
Length=2091826
Score = 134 bits (148), Expect = 1e-26
Identities = 158/212 (75%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | ||| ||||||||||||||||||||||||| || ||| ||| |||||||
Sbjct 2075922 ACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 2075981
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234
|||||||| || ||| | || | |||||||||||| || | ||||| || || ||
Sbjct 2075982 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 2076041
Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294
|| | | ||||| | ||| |||||| | ||| || | ||||||| | |
Sbjct 2076042 ATCTTGGAT--TTGACGTTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGTCT 2076099
Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
| |||||||||||||| || ||||||||||||
Sbjct 2076100 TACCGGTCAATGTTTTGACGAAAATTTGCATT 2076131
Score = 127 bits (140), Expect = 2e-24
Identities = 156/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | ||| ||||||||||||||||||||||||| || ||| ||| |||||||
Sbjct 2075694 ACCAAGTGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 2075753
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234
|||||||| || ||| | || | |||||||||||| || | ||||| || || ||
Sbjct 2075754 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 2075813
Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294
|| | | ||||| | ||| |||||| | || || | ||||||| | |
Sbjct 2075814 ATCTTGGAT--TTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCT 2075871
Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| |||||||||||||| || |||||||||||
Sbjct 2075872 TACCGGTCAATGTTTTGACGAAAATTTGCAT 2075902
Score = 123 bits (136), Expect = 2e-23
Identities = 155/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | ||| ||||||||||||||||||||||||| || ||| ||| |||||||
Sbjct 2075466 ACCAAGTGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 2075525
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GG 18234
|||||||| || ||| | || | |||||||||||| || | ||||| || || ||
Sbjct 2075526 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 2075585
Query 18235 CAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTT 18294
|| | | ||||| | ||| |||||| | || || | ||||||| | |
Sbjct 2075586 ATCTTGGAT--TTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCT 2075643
Query 18295 TGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| || ||||||||||| || |||||||||||
Sbjct 2075644 TACCAGTCAATGTTTTGACGAAAATTTGCAT 2075674
>seq3
Length=962442
Score = 118 bits (130), Expect = 8e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||| ||||| ||||||||||||| || ||| ||| |||||||
Sbjct 22549 ACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 22490
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
|||||||| || ||| |||| | |||||||||||| || | |||||||| ||
Sbjct 22489 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGG 22430
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| |||||| | ||| ||| | |||||| ||||
Sbjct 22429 ATCTTGGACTTGACATTGTCAATGGTGTCAGATGACTCAACTTCTAAAGTGATGGTTTTA 22370
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329
|| || | ||||| ||||| ||||||||| ||
Sbjct 22369 CCCGTAAGGGTTTTGACAAAGATTTGCATTCTT 22337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343958390705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |