Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4 192 5e-44
seq5 107 2e-18
seq3 82.4 7e-11
>seq4
Length=3023470
Score = 192 bits (212), Expect = 5e-44
Identities = 606/924 (66%), Gaps = 29/924 (3%)
Strand=Plus/Plus
Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566
|| |||||||||||| | || || ||| | | |||||||||||| ||| ||| |
Sbjct 2626018 GAAGAACCACTTTTGAAGGAAAACAAACGTCGTTATGTCATGTTTCCTATTAGATACCAT 2626077
Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626
|| |||||| | |||||||| ||||| |||||||| || ||||| | |||||| | ||
Sbjct 2626078 GAAATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGGACTGCAGAAGAAATTGAT 2626137
Query 57627 CTGTCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTATT 57683
| ||| ||||| |||||| || | || || ||| || ||| |||
Sbjct 2626138 TTAGGTAAAGATCTTCATGATTGGAGAGAGAAATTGAATGACAATGAAAGGTTTTTCATT 2626197
Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743
| | ||||| |||||||| || || |||||||||||||| || || ||||| |||
Sbjct 2626198 GGAAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGTGGAA 2626257
Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803
| ||||| ||||| ||| | | || || | || ||||| || || ||| |
Sbjct 2626258 AACTTTTCTGCTGAAGTTCAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAATCATG 2626317
Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CA 57861
|| |||||| | |||||||||| ||||| || | || || || || | ||||| ||
Sbjct 2626318 ATGGAAAACATTCATTCAGAAACTTATTCATTATTGATTGAAACTTATATCAAGGATCCA 2626377
Query 57862 ACGACGAGAAACG-TAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAG 57920
| | || | || | | ||||| || || ||||| || || || ||||||
Sbjct 2626378 A--AGGA-AGCCGATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAAG 2626434
Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980
|| || ||| | |||| |||||| || || || ||| || ||||| | |
Sbjct 2626435 GCTGATTGGGCCATCAGATGGATTCAAGATTCCGATGCATTGTTTGCTGAGAGATTGGTT 2626494
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC-TTTGCGGCAATATTTTGGAT 58039
|| || || || || || ||||| || ||| | | | | ||||| | || || ||| |
Sbjct 2626495 GCTTTTGCTGCTGTTGAGGGTATCTT-TTTCAGTGGATCGTTTGCTTCCATTTTCTGGTT 2626553
Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099
|||||| | || | ||||| || |||| ||| ||| || ||||| | || || ||
Sbjct 2626554 GAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGA 2626613
Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCA--ATAAACC-GAC 58156
||| | || ||||||||||| ||| | ||| | | |||| || ||| ||| |||
Sbjct 2626614 AGGTTTACACACTGATTTTGCATGCTTGTTGT--TTGCTCATTTACAACATAGACCTGAC 2626671
Query 58157 GCGGGATCGCATCTTGGA--CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214
| | | | ||| | ||||| || || || || | || ||||| || || |
Sbjct 2626672 CC---AAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTT 2626728
Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274
|| || || | || || || | || ||||| | | ||||||| | || ||
Sbjct 2626729 ACTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTT 2626788
Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCA----TTACAACAC 58330
|| ||||||||||||||| | ||| | | || |||| | | | ||||||
Sbjct 2626789 GAATTTGTTGCCGACAGATTATTGGTTG--CT--TTGGGTAACAAAAAAGTTTACAATGT 2626844
Query 58331 GAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGa 58390
| ||||| |||||||||||| | ||||| | | || ||||| || || || ||
Sbjct 2626845 CACCAATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGA 2626904
Query 58391 aaaaaaaGTTAGCGAATATCAAAA 58414
||||| |||| || || |||||
Sbjct 2626905 AAAAAGAGTTTCTGATTACCAAAA 2626928
Score = 145 bits (160), Expect = 7e-30
Identities = 981/1570 (62%), Gaps = 38/1570 (2%)
Strand=Plus/Plus
Query 22432 CAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTG 22491
||||||||| | || | | || || | ||||||||| || | ||| || | |
Sbjct 2500663 CAAATCTTTCAACAAGTATGGATTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGA 2500722
Query 22492 GTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGA 22551
|||||| || || ||| | || |||||| |||||||||| |||| || || | || ||
Sbjct 2500723 GTAAATATTTGAAGTGTATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGA 2500782
Query 22552 AGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAAT-TTTAC 22610
||| || ||||| || |||| || | |||||||||| ||||| || | || ||| |
Sbjct 2500783 AGCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTC 2500842
Query 22611 TCTTGAG-CATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTAT 22669
| | | |||| ||| ||||||| || | ||| | ||| ||||| ||||||
Sbjct 2500843 TTTCAATTCATC--CCAATCCCACAATTCAGTTGGCTTTC---TGTTCCACAAGTCGTAT 2500897
Query 22670 TGCAACACGCC--GCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCG 22727
||||||| || |||| || || ||||| ||| ||||| || ||||| | | ||
Sbjct 2500898 TGCAACAAACCTTGCGA--TGCTGGTGAGCCTTGGTAAGTTTCATAGGGACCTTCTTCCG 2500955
Query 22728 CGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGT 22787
| || | ||| || || | || | | ||| || || || || |||| | |
Sbjct 2500956 CCGCTAATTCAATTGATGCTTCAACAGCAGCATGATAGATTGTTTCAAAAATTTGAATAT 2501015
Query 22788 TCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCA 22847
||||||| || | | || | || | || | || || || || ||||
Sbjct 2501016 TCAATTCCCTAGCTTCTTGGGAATCAAATCCGATTCTCAAAACCATAAATGCATCAGCCA 2501075
Query 22848 TACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCA 22907
|| || || || | | || |||| || | ||| || || | || || || |
Sbjct 2501076 AGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCATGTTTGATCTCTCAGCTTCAGGAA 2501135
Query 22908 AAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNN 22967
|| || | || ||| || ||| ||||| || | || |||| ||| || |
Sbjct 2501136 CTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATTACGTGTAACAACTTTGGTGACGT 2501195
Query 22968 NNNNNNNNNNNTCAAAGTCGTA-AACGCCCGAT--------TGTACAACAAACTTGTTGA 23018
||||||| ||| | || | | || ||| ||| |
Sbjct 2501196 CATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAAGAAGGTA 2501255
Query 23019 CGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTT 23078
|| ||||| || | || || || || || || ||| | || || || |||||||
Sbjct 2501256 AAGCAATCGAAGCCAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTCAACAATTT 2501315
Query 23079 CGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGC 23138
| ||| | ||| | | || || |||||||| | |||||| || || |
Sbjct 2501316 CACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTAC 2501375
Query 23139 ACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTC 23198
| | ||||||||| | |||| | || || || ||||| || | ||| | ||| |
Sbjct 2501376 AAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAAGATGGAAT 2501435
Query 23199 GCCACATAGTCTGAGCGTGAACACGTCGCACGTAC--CTGCCTTCTTCCTCGTACTTTTG 23256
||||| | ||||| | | ||| | ||| | ||||||| |||||| || |
Sbjct 2501436 ACCACAATTTTTGAGCTTTGA-TTGTCTTTC-TACCACGACCTTCTTTCTCGTATTTCTC 2501493
Query 23257 GTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACA 23316
|||||| | |||||||| |||| ||| || |||| | || | || | ||| |
Sbjct 2501494 ATACAACTCAACAAATTCGTCACCATAAGTATCAGCCAAGTTTGGAGCTTCATTTGGAGA 2501553
Query 23317 CATGAGACTCCACATTGAGTCATTT---TCAACGCGTCTCATAAAAAGATCCGGTATCCA 23373
| | |||| || ||||| ||||| | | ||||||| | ||| || |||||
Sbjct 2501554 GAACAATGTCCA-AT--CACCATTTTGCTCAACTCTTTTCATAAACAAATCTGGGATCCA 2501610
Query 23374 TAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATC 23433
| ||| ||||| || | || | | || || || || ||||||| | | ||
Sbjct 2501611 CAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCTAATTTC 2501670
Query 23434 CAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCT 23493
| ||||| || | || || ||||| || || || || | ||||| || || |||||
Sbjct 2501671 AATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACCTGGTCT 2501730
Query 23494 CTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCAC 23553
||| || || || ||||| || ||||| || ||||||||| | || | | ||| || |
Sbjct 2501731 CTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAACCATTGGAAT 2501790
Query 23554 GAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTG 23613
| ||| || || | ||| || || | | ||| | | |||| ||||||
Sbjct 2501791 AATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGTGGAACGAATGTTGTG 2501850
Query 23614 AACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTC 23673
| || || || || || || | ||| || |||| || ||| || | ||||||
Sbjct 2501851 GATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCTTTAAAGTGTC 2501910
Query 23674 GTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGC 23733
|| || || || || || ||||| | || ||||||||||| || |||||||| |
Sbjct 2501911 ATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGG 2501970
Query 23734 TTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT 23793
||| || ||| |||| ||||| || | || |||||||||| | |||||
Sbjct 2501971 TTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTATCTTTGAGACAT 2502030
Query 23794 TAGATTGTACGTGTCGATGGC----GGCATCAATGTCCTCTCCGTGTATACCGATGGCGA 23849
| |||||| || || || | || || || || ||| || ||||| || || |
Sbjct 2502031 CAAATTGTAAGTCTCAATAACTCTTGGGAT--ATCTC--TTCCATGGATACCAATAGCAA 2502086
Query 23850 CGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATG 23909
| | ||| |||| || ||| ||||| || | || ||||| |||| |||||
Sbjct 2502087 CTCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATTAATACGTAACAAATATG 2502146
Query 23910 AACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGG 23969
| | | || ||||| |||||||| || | ||||| || ||||| || | || || |
Sbjct 2502147 ATCTCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTGAAATCACGGTCATAAACAATTG 2502206
Query 23970 CCGAATTCAA 23979
| || || ||
Sbjct 2502207 CTGAGTTTAA 2502216
>seq5
Length=2091826
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| || || |||| || || || |||||| | || |||||| | ||
Sbjct 2075902 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075843
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | |||||| | || ||||| ||||| | || || || ||
Sbjct 2075842 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075783
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| ||||| |||||||| || ||| || ||| || |||
Sbjct 2075782 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075723
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||||||| || | || |||| | ||| |||| || ||||
Sbjct 2075722 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGTA 2075674
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| || || |||| || || || |||||| | || |||||| | ||
Sbjct 2075674 ATGCAAATTTTCGTCAAAACATTGACTGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075615
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | |||||| | || ||||| ||||| | || || || ||
Sbjct 2075614 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075555
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| ||||| |||||||| || ||| || ||| || |||
Sbjct 2075554 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075495
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|||||||||||||| || | || |||| | ||| |||| || |||
Sbjct 2075494 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGGT 2075447
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| || || |||| || || || |||||| | || ||||| | ||
Sbjct 2076130 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATCA 2076071
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | |||||| | || ||||| ||||| | || || || ||
Sbjct 2076070 GACACTATTGACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2076011
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| ||||| |||||||| || ||| || ||| || |||
Sbjct 2076010 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075951
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||||||| || | || |||| | ||| |||| || ||||
Sbjct 2075950 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGTA 2075902
>seq3
Length=962442
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || || || || || || ||||| ||||| | || ||||| | ||
Sbjct 22341 ATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATCT 22400
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || ||||||||||| | || || || ||
Sbjct 22401 GACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCAA 22460
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| ||||| |||||||| || ||| || ||| || |||
Sbjct 22461 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 22520
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| ||||| ||||| ||| | || |||| | ||| |||| || |||
Sbjct 22521 ATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 22568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766349851280
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