Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4 192 5e-44 seq5 107 2e-18 seq3 82.4 7e-11 >seq4 Length=3023470 Score = 192 bits (212), Expect = 5e-44 Identities = 606/924 (66%), Gaps = 29/924 (3%) Strand=Plus/Plus Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566 || |||||||||||| | || || ||| | | |||||||||||| ||| ||| | Sbjct 2626018 GAAGAACCACTTTTGAAGGAAAACAAACGTCGTTATGTCATGTTTCCTATTAGATACCAT 2626077 Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 || |||||| | |||||||| ||||| |||||||| || ||||| | |||||| | || Sbjct 2626078 GAAATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGGACTGCAGAAGAAATTGAT 2626137 Query 57627 CTGTCTAAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTATT 57683 | ||| ||||| |||||| || | || || ||| || ||| ||| Sbjct 2626138 TTAGGTAAAGATCTTCATGATTGGAGAGAGAAATTGAATGACAATGAAAGGTTTTTCATT 2626197 Query 57684 AAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAA 57743 | | ||||| |||||||| || || |||||||||||||| || || ||||| ||| Sbjct 2626198 GGAAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGTGGAA 2626257 Query 57744 AGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCC 57803 | ||||| ||||| ||| | | || || | || ||||| || || ||| | Sbjct 2626258 AACTTTTCTGCTGAAGTTCAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAATCATG 2626317 Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CA 57861 || |||||| | |||||||||| ||||| || | || || || || | ||||| || Sbjct 2626318 ATGGAAAACATTCATTCAGAAACTTATTCATTATTGATTGAAACTTATATCAAGGATCCA 2626377 Query 57862 ACGACGAGAAACG-TAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAG 57920 | | || | || | | ||||| || || ||||| || || || |||||| Sbjct 2626378 A--AGGA-AGCCGATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAAG 2626434 Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980 || || ||| | |||| |||||| || || || ||| || ||||| | | Sbjct 2626435 GCTGATTGGGCCATCAGATGGATTCAAGATTCCGATGCATTGTTTGCTGAGAGATTGGTT 2626494 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC-TTTGCGGCAATATTTTGGAT 58039 || || || || || || ||||| || ||| | | | | ||||| | || || ||| | Sbjct 2626495 GCTTTTGCTGCTGTTGAGGGTATCTT-TTTCAGTGGATCGTTTGCTTCCATTTTCTGGTT 2626553 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 |||||| | || | ||||| || |||| ||| ||| || ||||| | || || || Sbjct 2626554 GAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGA 2626613 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCA--ATAAACC-GAC 58156 ||| | || ||||||||||| ||| | ||| | | |||| || ||| ||| ||| Sbjct 2626614 AGGTTTACACACTGATTTTGCATGCTTGTTGT--TTGCTCATTTACAACATAGACCTGAC 2626671 Query 58157 GCGGGATCGCATCTTGGA--CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | | | | ||| | ||||| || || || || | || ||||| || || | Sbjct 2626672 CC---AAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTT 2626728 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || | || || || | || ||||| | | ||||||| | || || Sbjct 2626729 ACTGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTT 2626788 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCA----TTACAACAC 58330 || ||||||||||||||| | ||| | | || |||| | | | |||||| Sbjct 2626789 GAATTTGTTGCCGACAGATTATTGGTTG--CT--TTGGGTAACAAAAAAGTTTACAATGT 2626844 Query 58331 GAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGa 58390 | ||||| |||||||||||| | ||||| | | || ||||| || || || || Sbjct 2626845 CACCAATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGA 2626904 Query 58391 aaaaaaaGTTAGCGAATATCAAAA 58414 ||||| |||| || || ||||| Sbjct 2626905 AAAAAGAGTTTCTGATTACCAAAA 2626928 Score = 145 bits (160), Expect = 7e-30 Identities = 981/1570 (62%), Gaps = 38/1570 (2%) Strand=Plus/Plus Query 22432 CAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTG 22491 ||||||||| | || | | || || | ||||||||| || | ||| || | | Sbjct 2500663 CAAATCTTTCAACAAGTATGGATTAACAATTTGAAACTCACCAGCCAACACTCTTCTAGA 2500722 Query 22492 GTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGA 22551 |||||| || || ||| | || |||||| |||||||||| |||| || || | || || Sbjct 2500723 GTAAATATTTGAAGTGTATGGCTCGAAACATTCATTGTTACCCAAAATTTGTGATGTAGA 2500782 Query 22552 AGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAAT-TTTAC 22610 ||| || ||||| || |||| || | |||||||||| ||||| || | || ||| | Sbjct 2500783 AGCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCATACCGTGTTTGGCAAGCTTTTC 2500842 Query 22611 TCTTGAG-CATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTAT 22669 | | | |||| ||| ||||||| || | ||| | ||| ||||| |||||| Sbjct 2500843 TTTCAATTCATC--CCAATCCCACAATTCAGTTGGCTTTC---TGTTCCACAAGTCGTAT 2500897 Query 22670 TGCAACACGCC--GCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCG 22727 ||||||| || |||| || || ||||| ||| ||||| || ||||| | | || Sbjct 2500898 TGCAACAAACCTTGCGA--TGCTGGTGAGCCTTGGTAAGTTTCATAGGGACCTTCTTCCG 2500955 Query 22728 CGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGT 22787 | || | ||| || || | || | | ||| || || || || |||| | | Sbjct 2500956 CCGCTAATTCAATTGATGCTTCAACAGCAGCATGATAGATTGTTTCAAAAATTTGAATAT 2501015 Query 22788 TCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCA 22847 ||||||| || | | || | || | || | || || || || |||| Sbjct 2501016 TCAATTCCCTAGCTTCTTGGGAATCAAATCCGATTCTCAAAACCATAAATGCATCAGCCA 2501075 Query 22848 TACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCA 22907 || || || || | | || |||| || | ||| || || | || || || | Sbjct 2501076 AGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCATGTTTGATCTCTCAGCTTCAGGAA 2501135 Query 22908 AAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNN 22967 || || | || ||| || ||| ||||| || | || |||| ||| || | Sbjct 2501136 CTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATTACGTGTAACAACTTTGGTGACGT 2501195 Query 22968 NNNNNNNNNNNTCAAAGTCGTA-AACGCCCGAT--------TGTACAACAAACTTGTTGA 23018 ||||||| ||| | || | | || ||| ||| | Sbjct 2501196 CATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACCATCCTGCTCAATAAAAGAAGGTA 2501255 Query 23019 CGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTT 23078 || ||||| || | || || || || || || ||| | || || || ||||||| Sbjct 2501256 AAGCAATCGAAGCCAAGTTACAAACAGCAACTTCATCTGGTGCCGAATATTCAACAATTT 2501315 Query 23079 CGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGC 23138 | ||| | ||| | | || || |||||||| | |||||| || || | Sbjct 2501316 CACAACACAAGTTGGAAGATTTAATAACACCCAAATTTTTTTGGTTGGACTTGGTGTTAC 2501375 Query 23139 ACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTC 23198 | | ||||||||| | |||| | || || || ||||| || | ||| | ||| | Sbjct 2501376 AAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAGTTTGTGCCTCCAAGATGGAAT 2501435 Query 23199 GCCACATAGTCTGAGCGTGAACACGTCGCACGTAC--CTGCCTTCTTCCTCGTACTTTTG 23256 ||||| | ||||| | | ||| | ||| | ||||||| |||||| || | Sbjct 2501436 ACCACAATTTTTGAGCTTTGA-TTGTCTTTC-TACCACGACCTTCTTTCTCGTATTTCTC 2501493 Query 23257 GTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACA 23316 |||||| | |||||||| |||| ||| || |||| | || | || | ||| | Sbjct 2501494 ATACAACTCAACAAATTCGTCACCATAAGTATCAGCCAAGTTTGGAGCTTCATTTGGAGA 2501553 Query 23317 CATGAGACTCCACATTGAGTCATTT---TCAACGCGTCTCATAAAAAGATCCGGTATCCA 23373 | | |||| || ||||| ||||| | | ||||||| | ||| || ||||| Sbjct 2501554 GAACAATGTCCA-AT--CACCATTTTGCTCAACTCTTTTCATAAACAAATCTGGGATCCA 2501610 Query 23374 TAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATC 23433 | ||| ||||| || | || | | || || || || ||||||| | | || Sbjct 2501611 CAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTACCATGGTTCTTTCTAATTTC 2501670 Query 23434 CAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCT 23493 | ||||| || | || || ||||| || || || || | ||||| || || ||||| Sbjct 2501671 AATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATAAAGCAAAAGCACCTGGTCT 2501730 Query 23494 CTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCAC 23553 ||| || || || ||||| || ||||| || ||||||||| | || | | ||| || | Sbjct 2501731 CTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGAAAACACGAACCATTGGAAT 2501790 Query 23554 GAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTG 23613 | ||| || || | ||| || || | | ||| | | |||| |||||| Sbjct 2501791 AATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCACCAGTGGAACGAATGTTGTG 2501850 Query 23614 AACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTC 23673 | || || || || || || | ||| || |||| || ||| || | |||||| Sbjct 2501851 GATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGGCACATGTCTTTAAAGTGTC 2501910 Query 23674 GTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGC 23733 || || || || || || ||||| | || ||||||||||| || |||||||| | Sbjct 2501911 ATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGAAACAAGATGACATTTGTGG 2501970 Query 23734 TTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT 23793 ||| || ||| |||| ||||| || | || |||||||||| | ||||| Sbjct 2501971 TTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAGTAAAGTATCTTTGAGACAT 2502030 Query 23794 TAGATTGTACGTGTCGATGGC----GGCATCAATGTCCTCTCCGTGTATACCGATGGCGA 23849 | |||||| || || || | || || || || ||| || ||||| || || | Sbjct 2502031 CAAATTGTAAGTCTCAATAACTCTTGGGAT--ATCTC--TTCCATGGATACCAATAGCAA 2502086 Query 23850 CGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATG 23909 | | ||| |||| || ||| ||||| || | || ||||| |||| ||||| Sbjct 2502087 CTCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATTAATACGTAACAAATATG 2502146 Query 23910 AACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGG 23969 | | | || ||||| |||||||| || | ||||| || ||||| || | || || | Sbjct 2502147 ATCTCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTGAAATCACGGTCATAAACAATTG 2502206 Query 23970 CCGAATTCAA 23979 | || || || Sbjct 2502207 CTGAGTTTAA 2502216 >seq5 Length=2091826 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || |||| || || || |||||| | || |||||| | || Sbjct 2075902 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075843 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | |||||| | || ||||| ||||| | || || || || Sbjct 2075842 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075783 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || ||||| ||||| |||||||| || ||| || ||| || ||| Sbjct 2075782 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075723 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| || | || |||| | ||| |||| || |||| Sbjct 2075722 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGTA 2075674 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || |||| || || || |||||| | || |||||| | || Sbjct 2075674 ATGCAAATTTTCGTCAAAACATTGACTGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075615 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | |||||| | || ||||| ||||| | || || || || Sbjct 2075614 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075555 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || ||||| ||||| |||||||| || ||| || ||| || ||| Sbjct 2075554 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075495 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 |||||||||||||| || | || |||| | ||| |||| || ||| Sbjct 2075494 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGGT 2075447 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || |||| || || || |||||| | || ||||| | || Sbjct 2076130 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTCATCA 2076071 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | |||||| | || ||||| ||||| | || || || || Sbjct 2076070 GACACTATTGACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2076011 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || ||||| ||||| |||||||| || ||| || ||| || ||| Sbjct 2076010 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075951 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| || | || |||| | ||| |||| || |||| Sbjct 2075950 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGGTA 2075902 >seq3 Length=962442 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || || || || || ||||| ||||| | || ||||| | || Sbjct 22341 ATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATCT 22400 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||||| | || || || || Sbjct 22401 GACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCAA 22460 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || || ||||| ||||| |||||||| || ||| || ||| || ||| Sbjct 22461 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 22520 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || ||||| ||||| ||| | || |||| | ||| |||| || ||| Sbjct 22521 ATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 22568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766349851280