Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq4 288 9e-73 >seq4 Length=3023470 Score = 288 bits (318), Expect = 9e-73 Identities = 1149/1787 (64%), Gaps = 39/1787 (2%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 |||| ||||| | |||| | || || | || || |||| || ||||| || || Sbjct 2500340 TCAATGGTGAACTGGATAGCAGCAGAAGCAGCTTGCGTCCTCAAGTAGTACATACCTGTC 2500399 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 |||| || ||||||| ||||| ||||| || |||| ||| | || |||| Sbjct 2500400 TTTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAATTTACCCATGGTTGGATCT 2500459 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 | || | || | | |||||| ||| || || || ||| |||| || | ||||| Sbjct 2500460 TTGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCAGCTCTATCAGAAGCCATA 2500519 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 || | ||| ||||| || || |||||||| ||||| || | | || || | ||| Sbjct 2500520 TCAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTACAATGCCTTGATTTCGTCT 2500579 Query 37030 GGTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCA 37086 || | | | ||| |||||| |||||||| | | | | ||| || |||| || | Sbjct 2500580 GGAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATAATGCTACTCTTCATAGCG 2500639 Query 37087 TTATTCCACATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAA 37144 | |||||| || | ||| | | | ||| |||| | || |||||| |||| |||| Sbjct 2500640 TCATTCCAAAT--TCCTAAATCAACCAAATCTTTCAACAAGTATGGATTAACAATTTGAA 2500697 Query 37145 AATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCAT 37204 | || |||| || |||||||| | || ||||| ||| ||||| || | | |||| Sbjct 2500698 ACTCACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGCTCGAAACATTCAT 2500757 Query 37205 TATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTC 37264 | |||| || ||||| |||||||| |||||||||||||| || | | | | |||| Sbjct 2500758 TGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACCAACAAGGAGTTTC 2500817 Query 37265 TCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGT 37324 ||| || ||| | || | | ||| | ||||| ||||||||| || || ||||| | Sbjct 2500818 TCATACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATCCCACAATTCAGTTGGCT 2500877 Query 37325 TCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCT 37384 | | ||||| || ||||| | | ||||| ||||| || | | || || | Sbjct 2500878 TTCTGTTCCACAAGTCGTATTGCAACAAACCTTGCGATGCTGGTGAGCCTTGGTAAGTTT 2500937 Query 37385 CATAAGGTCCGTAAATTTTAGCTAGTTCGCAACT--AGATTCTAGTGCGGCATAATATAT 37442 |||| || || | |||| || ||| | | ||| | || |||| ||| || Sbjct 2500938 CATAGGGACCTTCTTCCGCCGCTAATT--CAATTGATGCTTCAACAGCAGCATGATAGAT 2500995 Query 37443 TGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAA 37502 |||||| |||||||| ||||| ||| | ||||||| | ||| ||| | | ||| Sbjct 2500996 TGTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAATCAAATCCGATTCTCAA 2501055 Query 37503 TAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATT 37562 | ||||| |||||||||| || || ||||| | | || ||||| ||| || | || Sbjct 2501056 AACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCATGTT 2501115 Query 37563 AGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATT--- 37619 ||||| | ||| ||||| || || || ||| || | | |||| | ||| Sbjct 2501116 TGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATTACG 2501175 Query 37620 TTTAACTAGTAT--TTTCGTAAT---TATTCTC-AACTTGT--CGAACATAAATA-CGTT 37670 | |||| | | | | ||| || || || || |||| | | ||| || | | Sbjct 2501176 TGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACCATC 2501235 Query 37671 ATTATTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTC 37730 | | || ||| | || | ||| || | | ||||| |||||||||||||| | Sbjct 2501236 CTGCTCAATAAAAGAAGGTAAAGCAATCGAAGCCAAGTTACAAACAGCAACTTCATC-TG 2501294 Query 37731 GTTACTAA-ATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGC 37789 || | || ||| | ||| || ||| | || ||| |||| |||||||| Sbjct 2501295 GTGCCGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATTTT 2501354 Query 37790 TTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTA 37849 |||| ||||| || | ||||||| ||| || || | || | || || || || Sbjct 2501355 TTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCAG 2501414 Query 37850 TTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA--Atttt 37907 |||| ||||| | || || | ||| || || ||||| | || | || | Sbjct 2501415 TTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGCTTTGATTGTCTTTCTACCACGAC 2501474 Query 37908 tttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATA--CATCGCAT 37965 ||||| | ||||||| ||| || | ||| || | | ||||| ||| Sbjct 2501475 CTTCTT--TCTCGTATTTCTCATACAACTCAACAAATTCGT--CACCATAAGTATCAGCC 2501530 Query 37966 AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCC 38025 || |||| ||| |||| | | | | ||| || ||| || || || | || | Sbjct 2501531 AAGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTC 2501590 Query 38026 ATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTC 38085 ||||| ||||| || | ||| || || | || || ||| | | |||| |||||| || Sbjct 2501591 ATAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTA 2501650 Query 38086 CCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTC--TATAT 38143 || |||||||| | | || || || |||||||||||||||||||| |||| Sbjct 2501651 CCATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATAT 2501710 Query 38144 AAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTAT 38203 ||| | | | || |||||||| || | ||| || |||| | ||| | | | ||||| | Sbjct 2501711 AAAGCAAAA--GCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGT 2501768 Query 38204 TATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAG 38263 | | | | | ||| || | |||||||| || | ||||| |||| | || || | Sbjct 2501769 TGAAAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGG 2501828 Query 38264 TACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTA 38323 ||| | | || || || || |||||| || ||||| ||| |||||| || | Sbjct 2501829 CACCAGTGGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCA 2501888 Query 38324 AAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTA 38383 | || ||| ||||| || ||| | |||||||| ||| || || || |||| | | Sbjct 2501889 AGGCACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCA 2501948 Query 38384 TAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCAT 38443 |||||| |||||||| || |||||| ||||| || || || ||||| ||| Sbjct 2501949 AGAAACAAGATGACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCAT 2502008 Query 38444 GTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCAT-CTATATCACCG 38502 | | || || ||| |||| |||| || || || || || || | ||||| | Sbjct 2502009 GAGTAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAAC-TCTTGGGATATCTCTT 2502067 Query 38503 CCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 || || ||||| | || || ||||| | || |||||||||||||| Sbjct 2502068 CCATGGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTC 2502114 Score = 251 bits (278), Expect = 7e-62 Identities = 589/881 (67%), Gaps = 16/881 (2%) Strand=Plus/Minus Query 11338 CTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATA 11397 |||||| || ||| ||||| | ||| || ||||| |||||||| | | || |||| Sbjct 2626929 CTTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATT 2626870 Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457 ||||||||| ||| ||||| |||||| | ||||||| ||| || | || Sbjct 2626869 CTCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCCAAAGCAACCAA 2626810 Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAG 11517 |||||| || || || ||||| | ||| ||| |||| || ||||||||| || | | Sbjct 2626809 TAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAA 2626750 Query 11518 ATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTAT 11577 | || || | ||| | || || || || ||||| || | ||| || ||| | || || Sbjct 2626749 ACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAAT 2626690 Query 11578 CGACGTTATAACTTCCTTAGAT--GGTGGATGTAATAAATGTTTAAACATTAAACACGCA 11635 | || | || || | | ||| |||| |||||| ||||| || || ||| Sbjct 2626689 T--CTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGCA 2626632 Query 11636 AAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGC 11695 |||||| ||||||||||| || | || || | |||||| ||||| || ||||| ||| Sbjct 2626631 AAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGC 2626572 Query 11696 ATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCC 11755 || ||||||| || || | ||| || || | |||||| || ||| || || || ||| Sbjct 2626571 ATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCC 2626512 Query 11756 TCCACAGCTGCAAATGCTACTACTCTTTCTCCA---TATACCT-TGTTGCTAGATATCCA 11811 || ||||| ||||| || || | ||| || || || | | | || || ||||| Sbjct 2626511 TCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGA-ATCCA 2626453 Query 11812 TTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAA 11871 | | ||||||||||||| |||||||| | || ||||| ||||| || ||||| Sbjct 2626452 TCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAA 2626393 Query 11872 ATGCATT--TTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCT 11929 | | | ||| | ||| | | ||| || || || ||||| ||| ||||| Sbjct 2626392 --GAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCT 2626335 Query 11930 GAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGT 11989 |||||||| |||||||| ||||| || ||||| || || || || | | || Sbjct 2626334 GAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGA 2626275 Query 11990 ACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAA 12049 || || || |||| ||||| | || || ||||| |||||||||||| | || ||| Sbjct 2626274 ACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAA 2626215 Query 12050 AATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATC---CCAATCA 12106 || || | || | || || | |||| | | | | ||||| || ||||||| Sbjct 2626214 AAGGCCAAGATTCTTCCAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAATCA 2626155 Query 12107 TCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTA 12166 | | |||||| |||||| | |||||| | ||||| || ||| | | | || Sbjct 2626154 TGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTTG 2626095 Query 12167 TACATTTTCCAGATATCATGATACTTAATAGGGAAAATAAC 12207 ||||||| ||| || ||||| || ||||||| || || || Sbjct 2626094 TACATTTGCCAAATTTCATGGTATCTAATAGGAAACATGAC 2626054 Score = 102 bits (112), Expect = 8e-17 Identities = 384/598 (64%), Gaps = 6/598 (1%) Strand=Plus/Minus Query 38016 TACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATA 38075 ||| | || |||||| |||||||| | ||| || || ||| ||||| | || | | | Sbjct 920556 TACTCTTTGCATAAACAAATCAGGAATCCACAACCCATAAAACAAATCCCTCGTACGAAA 920497 Query 38076 TTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGG 38135 ||||||||||| ||||||||| | | ||| || || || | ||| || ||||| || Sbjct 920496 CTCTTCGTTCCCATGATTCTTTCTCATGTTTAAAATCTCAAACACATCGGCATGCCAAGG 920437 Query 38136 TTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAAC 38195 || | || || | | |||||||||||||| | || || || | || ||||| | Sbjct 920436 CTCCAAGTAGATAGCGAAAGCTCCTGGTCTTTTGCCTCCACCTTGGTCAACATATCGGGC 920377 Query 38196 TGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGA 38255 ||||| || ||| || |||||| || |||| ||| | | | || || | | || Sbjct 920376 AGTGTTGTTGAATACTCGTAACATGGGAACTACTCCACCTGCTCTTCCATTGGTGCTGGC 920317 Query 38256 TATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTT 38315 ||||| | || | || | ||||| || | ||| || || || | | ||| Sbjct 920316 TATATGCGAGCCTTGGGCCCTAATATTGTGAATATGAATTCCAATACCGCCAGAAGCTTT 920257 Query 38316 TGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTAT 38375 || ||||| || || | | ||| | | | || || || || |||||||| || Sbjct 920256 AGAAATTAACGCCGCTTCATGAAGCGTTTGATAGATCCCATCAATTGAATCATCCTTCAT 920197 Query 38376 TGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGG 38435 || || | ||| || || | | | | |||||| ||| ||| ||| || Sbjct 920196 TGCTAACAAAAAGCAGGATGAAAGGTAGTTGTACGCGCATCCGGCATTATATAGTGTTGG 920137 Query 38436 AGATGCATGTATGAACCATTTTTCCGACAAATAATTA--TATGTTTCTATTACATCATCT 38493 |||||| ||||| |||||| ||| || | || |||||||| || | | | Sbjct 920136 CAGTGCATGGATGAAGTATTTTTGGGAC--ATTAGTACGTATGTTTCCTCAACCGCTTGT 920079 Query 38494 ATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATT 38553 || ||| | |||||| ||| || || || | | ||| | || ||| |||| | Sbjct 920078 ATGTCATCTTGGTGAATTTCTATAGCCACTCTGAGAAACATGTATTCTGGAGTTTCAGCT 920019 Query 38554 ATTTTATTATTCTGTT-TAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAA 38610 ||||| || | ||| | ||||| || ||||| || || || |||||||||||| Sbjct 920018 ATTTTGTT-GCCAGTTCTCCAAAGATATGAGTTTTCCAAAGTCTTGATTCCAAAATAA 919962 Score = 100 bits (110), Expect = 3e-16 Identities = 290/441 (66%), Gaps = 8/441 (2%) Strand=Plus/Minus Query 37132 TTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGT 37191 || || || ||||| || || |||| |||| | ||||| | ||| || |||||| Sbjct 921452 TTCACCACTTGAAATTCGCCTGATATCACTCGACGAGTATACAAGTTGGAGGTGTATGGT 921393 Query 37192 TCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATT 37251 || | ||||||| | ||| ||||||||||| || ||||||||||| || |||| | Sbjct 921392 TCGAAACACTCATTGAACCCTAAGATTTGAGATGTTGAAGCAGTAGGCATGGGAGCTACT 921333 Query 37252 AGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATC-CCA 37310 | ||| |||||||| ||||| | | | | | ||||| | || ||| || || Sbjct 921332 AAAAGTGAGTTTCTCAACCCATGACTCCTCACATTATCTTTTAACTGATCCCAGTCATCA 921273 Query 37311 TAAATCTGTTGGGTTCTTTA-ACCACATATCATATTGTAGAATACCTTTACTCGCTGGAG 37369 || | | | |||| || | |||||||||| |||| | ||| ||| ||||||| Sbjct 921272 TAGAATTCT--GGTTTTTGATTCCACATATCAAATTGCAAAATGTCTTGCGAAGCTGGAG 921215 Query 37370 AATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACT--AGATTCTAG 37427 | | | | || ||||| || | || | ||| || || ||| | | |||| Sbjct 921214 ATCCAGCAAAGGTTGAGTAAGGACCCTCAAGTATAGATAATT--CAAGTGAGGCCTCTAC 921157 Query 37428 TGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATC 37487 || |||| ||| || ||||| || ||||| ||| | | |||| || ||| || Sbjct 921156 AGCAGCATGATAGATGGTTTCAAAGATTTGCGAATTGAGTTTTTTAGCCTCTAGAGAGTC 921097 Query 37488 GAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGG 37547 |||| | | |||| | ||| | |||||| | ||| || || || ||| |||| || Sbjct 921096 AAATGGTAACCTCAATTCGAGAAATAAATCAGCTAGACCTTGTACGCCTATAGCTATTGG 921037 Query 37548 TCTATGTTTCTTATTAGATCT 37568 || || || || || ||||| Sbjct 921036 TCGATTCTTTTTGTTTGATCT 921016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524747290960