Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4 295 6e-75 >seq4 Length=3023470 Score = 295 bits (326), Expect = 6e-75 Identities = 601/879 (68%), Gaps = 23/879 (3%) Strand=Plus/Minus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || ||| ||||||||||||||| || || || ||||| ||| || ||||| Sbjct 2626928 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2626869 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAA 13487 ||||||||||| |||||||| || ||||| | ||||| | ||| | | | || Sbjct 2626868 TCCATAAAATCAAATGGATTGGT-GACATTGTAAACTTTTTTGTTACCCAAAGCAACCAA 2626810 Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547 |||||| || |||| ||| |||| ||||||| |||| || | ||||||||| || | | Sbjct 2626809 TAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAA 2626750 Query 13548 TTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607 | || || | | || ||| || ||||||||||| || || || || | ||||| Sbjct 2626749 ACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAAT 2626690 Query 13608 AATCTTAATAATGTCATTAGA--AGGAGGATATTTTAGATGTTTAAAAATTAAACACGCA 13665 | | || ||| | || | ||| || || || ||| ||| | || || ||| Sbjct 2626689 TCTTTCAACAATCT--TTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGCA 2626632 Query 13666 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13725 |||||| || | || ||||| | || ||| | ||| || ||||| || ||||||||| Sbjct 2626631 AAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGC 2626572 Query 13726 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 13785 || ||||||| || || ||||| || || | ||| || ||||| || || || ||| Sbjct 2626571 ATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCC 2626512 Query 13786 TCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCA 13844 ||||| |||||||| || | | || || ||||| |||| | | |||| ||||| Sbjct 2626511 TCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGA-ATCCA 2626453 Query 13845 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904 | | | ||||| |||| || |||||||| | || ||||| || ||||||||||| Sbjct 2626452 TCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAA 2626393 Query 13905 ATGTTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 13961 || |||| |||| | | |||| || || || ||||| | ||| ||| |||| Sbjct 2626392 GAAATCGGCTTC-CTTTGGATCCTTG--ATATAAGTTTCAATCAATAATGAATAAGTTTC 2626336 Query 13962 AGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14021 || || |||||||| || || || ||||||||||| || | ||||| | ||| Sbjct 2626335 TGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTG 2626276 Query 14022 TACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAA 14081 || || | |||| |||| |||||||||||||||||||||||||| || || || Sbjct 2626275 AACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAA 2626216 Query 14082 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG---TTGAGTTT---TTTCCA 14135 ||| ||||| || || ||| || | | ||||||| || | ||| | |||| Sbjct 2626215 AAAGGCCAAGATTCTTCCAATGAAAAA---CCTTTCATTGTCATTCAATTTCTCTCTCCA 2626159 Query 14136 ATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTT 14195 ||| | ||| ||| | ||| | ||| || | ||||| || || |||| || Sbjct 2626158 ATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTT 2626099 Query 14196 TTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14234 || |||||| ||| ||||| | ||| |||||||| Sbjct 2626098 CTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAA 2626060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588746158760