Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq4 295 6e-75
>seq4
Length=3023470
Score = 295 bits (326), Expect = 6e-75
Identities = 601/879 (68%), Gaps = 23/879 (3%)
Strand=Plus/Minus
Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428
||||| || ||| ||||||||||||||| || || || ||||| ||| || |||||
Sbjct 2626928 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2626869
Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAA 13487
||||||||||| |||||||| || ||||| | ||||| | ||| | | | ||
Sbjct 2626868 TCCATAAAATCAAATGGATTGGT-GACATTGTAAACTTTTTTGTTACCCAAAGCAACCAA 2626810
Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547
|||||| || |||| ||| |||| ||||||| |||| || | ||||||||| || | |
Sbjct 2626809 TAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAA 2626750
Query 13548 TTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607
| || || | | || ||| || ||||||||||| || || || || | |||||
Sbjct 2626749 ACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAAT 2626690
Query 13608 AATCTTAATAATGTCATTAGA--AGGAGGATATTTTAGATGTTTAAAAATTAAACACGCA 13665
| | || ||| | || | ||| || || || ||| ||| | || || |||
Sbjct 2626689 TCTTTCAACAATCT--TTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGCA 2626632
Query 13666 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13725
|||||| || | || ||||| | || ||| | ||| || ||||| || |||||||||
Sbjct 2626631 AAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGC 2626572
Query 13726 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 13785
|| ||||||| || || ||||| || || | ||| || ||||| || || || |||
Sbjct 2626571 ATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCC 2626512
Query 13786 TCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCA 13844
||||| |||||||| || | | || || ||||| |||| | | |||| |||||
Sbjct 2626511 TCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGA-ATCCA 2626453
Query 13845 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904
| | | ||||| |||| || |||||||| | || ||||| || |||||||||||
Sbjct 2626452 TCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAA 2626393
Query 13905 ATGTTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 13961
|| |||| |||| | | |||| || || || ||||| | ||| ||| ||||
Sbjct 2626392 GAAATCGGCTTC-CTTTGGATCCTTG--ATATAAGTTTCAATCAATAATGAATAAGTTTC 2626336
Query 13962 AGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14021
|| || |||||||| || || || ||||||||||| || | ||||| | |||
Sbjct 2626335 TGAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTG 2626276
Query 14022 TACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAA 14081
|| || | |||| |||| |||||||||||||||||||||||||| || || ||
Sbjct 2626275 AACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAA 2626216
Query 14082 AAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG---TTGAGTTT---TTTCCA 14135
||| ||||| || || ||| || | | ||||||| || | ||| | ||||
Sbjct 2626215 AAAGGCCAAGATTCTTCCAATGAAAAA---CCTTTCATTGTCATTCAATTTCTCTCTCCA 2626159
Query 14136 ATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTT 14195
||| | ||| ||| | ||| | ||| || | ||||| || || |||| ||
Sbjct 2626158 ATCATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTT 2626099
Query 14196 TTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14234
|| |||||| ||| ||||| | ||| ||||||||
Sbjct 2626098 CTTGTACATTTGCCAAATTTCATGGTATCTAATAGGAAA 2626060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588746158760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |