Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq4 242 3e-59 >seq4 Length=3023470 Score = 242 bits (268), Expect = 3e-59 Identities = 585/878 (67%), Gaps = 17/878 (2%) Strand=Plus/Minus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| || || ||||||||||||||| || || || || || | || || ||||| Sbjct 2626928 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2626869 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTA---TTTTTTACACCCTAATTCTAGT 12976 ||||||||||| || ||||| | ||| | ||| |||||| || || | | Sbjct 2626868 TCCATAAAATCAAATGGATTGGTG--ACATT-GTAAACTTTTTTGTTACCCAAAGCAACC 2626812 Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 || |||||||| |||||||| || | || || ||| || | ||| |||||||| | Sbjct 2626811 AATAATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAAC 2626752 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096 || | || |||| || || || || || | |||||| || ||||||||||| ||| Sbjct 2626751 AAACTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATA 2626692 Query 13097 ATGTCTCTTATTACGTTCTCTAATGGAGG---ATTTGATAGATGCTTAAACATCATACAT 13153 || |||| || ||| | ||| || | || ||| ||||| || ||| Sbjct 2626691 AT---TCTTTCAACAATCTTTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCAT 2626635 Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213 ||||||||| ||| || |||||||| | || || | || || ||||| || | || Sbjct 2626634 GCAAAATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCT 2626575 Query 13214 GGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATT 13273 ||||| | |||| || || | ||| || || | ||||||||| || ||||| || Sbjct 2626574 GGCATTAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATA 2626515 Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATC 13333 || ||||| || ||||| || | ||| || ||| || || || | | ||| Sbjct 2626514 CCCTCAACAGCAGCAAAAGCAACCAATCTCTCAGCAAACAATGCATCGGAATCTTGAATC 2626455 Query 13334 CACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAAT 13393 || | ||||||| | || || | ||||| || |||| || || || ||| Sbjct 2626454 CATCTGATGGCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAAT 2626395 Query 13394 AAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCT 13453 || ||| |||||| || |||||||| || |||||||| ||| ||||| Sbjct 2626394 AAGAAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCT 2626335 Query 13454 GAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGA 13513 |||||||| ||||||||| ||||||||||||||||| || | || || | | ||| Sbjct 2626334 GAATGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGA 2626275 Query 13514 ACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaa 13573 ||||| | |||| |||| | |||||||| ||||| || || ||| ||||| ||| Sbjct 2626274 ACTTCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAA 2626215 Query 13574 aaaG-CAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAA---CTTTAACCAATC 13629 || | |||| | | | ||| || |||| || || ||| || | |||||| Sbjct 2626214 AAGGCCAAGATTCTTC-CAATGAAAAACCTTTCATTGTCATTCAATTTCTCTCTCCAATC 2626156 Query 13630 TGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTT 13689 ||| |||||| |||||| | || || | ||||| || || || |||||||||| Sbjct 2626155 ATGAAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTT 2626096 Query 13690 ATACATCATCCATATATCCTTATAAACAATGGGAAACA 13727 ||||| ||| || || | || ||| ||||||| Sbjct 2626095 GTACATTTGCCAAATTTCATGGTATCTAATAGGAAACA 2626058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982352726618