Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26]
9 sequences; 13,030,174 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq5 159 8e-34
seq4 159 8e-34
>seq5
Length=2091826
Score = 159 bits (176), Expect = 8e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|||||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | ||||
Sbjct 2075472 TGTAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 2075531
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||||||||| | || |||||||| || || || |||||||| || || |||||
Sbjct 2075532 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 2075591
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| ||| ||||| || | || || | ||| ||||||| || || |||||||||||
Sbjct 2075592 GATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTACCAGTC 2075651
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
| |||||| || || || |||||
Sbjct 2075652 AATGTTTTGACGAAAATTTGCAT 2075674
Score = 150 bits (166), Expect = 4e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| ||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | ||||
Sbjct 2075700 TGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 2075759
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||||||||| | || |||||||| || || || |||||||| || || |||||
Sbjct 2075760 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 2075819
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| ||| ||||| || | || || | ||| ||||||| || || |||||||| ||
Sbjct 2075820 GATTTGACATTGTCAATAGTGTCTGATGATTCAACCTCTAAGGTGATGGTCTTACCGGTC 2075879
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
| |||||| || || || |||||
Sbjct 2075880 AATGTTTTGACGAAAATTTGCAT 2075902
Score = 143 bits (158), Expect = 6e-29
Identities = 156/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| ||||| |||||||| ||||| || ||||| || | ||||||||| ||||| | ||||
Sbjct 2075928 TGCAATGTGGATTCTTTTTGAATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGT 2075987
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||||||||| | || |||||||| || || || |||||||| || || |||||
Sbjct 2075988 TTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATCTTG 2076047
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| ||| || || || | || || | || ||||||| || || |||||||| ||
Sbjct 2076048 GATTTGACGTTGTCAATAGTGTCTGATGACTCAACCTCTAAGGTGATGGTCTTACCGGTC 2076107
Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563
| |||||| || || || |||||| ||
Sbjct 2076108 AATGTTTTGACGAAAATTTGCATTGTG 2076134
>seq4
Length=3023470
Score = 159 bits (176), Expect = 8e-34
Identities = 546/840 (65%), Gaps = 21/840 (3%)
Strand=Plus/Plus
Query 268729 TGATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGA 268788
||| || ||| |||||||| |||| | || || || ||||||| ||||||| | ||
Sbjct 2626077 TGAAATTTGGCAAATGTACAAGAAGGCTGAAGCATCATTCTGGACTGCAGAAGAAATTGA 2626136
Query 268789 TCTGTCTTATGA-CTTAATAGATTGGAAA----AATTTAAAACCAGAAGAAAGAAGATTT 268843
| | | | || ||| || ||||||| | |||| || || | ||||| ||
Sbjct 2626137 TTTAGGTAAAGATCTTCAT-GATTGGAGAGAGAAATTGAATGACA-ATGAAAGGTTTTTC 2626194
Query 268844 ATATCTTATATTCTTG-CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGT 268902
|| | | | ||||| | ||||| || | ||||||||| ||||| ||||| | ||
Sbjct 2626195 AT-TGGAAGAATCTTGGCCTTTTTCGCTGCCTCTGATGGTATTGTTAATGAAAACTTGGT 2626253
Query 268903 AGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGAT 268962
|| || || | | || || || ||||||||||||| || ||||| || ||||| ||
Sbjct 2626254 GGAAAACTTTTCTGCTGAAGTTCAAATTCCTGAAGCCAAATCATTTTATGGTTTCCAAAT 2626313
Query 268963 AGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGA 269022
|| ||||| ||||||||||| | || |||| || || |||||||| | ||
Sbjct 2626314 CATGATGGAAAACATTCATTCAGAAACTTATTCATTATTGATTGAAACTTATATCAAGGA 2626373
Query 269023 TAACAACGAAAAGAAAAGACTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaa 269082
| || ||| | |||| | |||| ||| || | | ||| ||
Sbjct 2626374 TCCAAAGGAAGCCGATTTCTTATTCAATGCTATTGAAACCATCCCTCAAATTAAAAAGAA 2626433
Query 269083 aTCTGAATGGGCTCTGAAATGGATAAACGATAGCGC-GCCTTAC--GGAGAAAGGTTAGT 269139
|||| ||||| | | |||||| | ||| || || || | || || || ||
Sbjct 2626434 GGCTGATTGGGCCATCAGATGGATTCAAGATTCCGATGCATTGTTTGCTGAGAGATTGGT 2626493
Query 269140 TGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTT 269199
||||||||| ||||| || ||||| || || || || ||||| | || || |||||
Sbjct 2626494 TGCTTTTGCTGCTGTTGAGGGTATCTTTTTCAGTGGATCGTTTGCTTCCATTTTCTGGTT 2626553
Query 269200 GAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGA 269259
|||||| ||||| | ||||||||||| || || || || |||||||| | | || ||
Sbjct 2626554 GAAGAAGAGAGGATTAATGCCAGGATTGACCTTTTCCAATGAATTGATTTGTCGTGATGA 2626613
Query 269260 AGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTC 269319
|||||||||| || || || || || || ||| || ||| | ||| | ||||
Sbjct 2626614 AGGTTTACACACTGATTTTGCATGCTTGTTGTTTGCTCATT---TACAACATAGACCTGA 2626670
Query 269320 TCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAAC 269379
| | | | || | |||||| | ||| ||| | |||| |||||| | ||
Sbjct 2626671 CCCAAAGATTGTTGAAAGAATTATTACTGAAGCAGTTGAAATTGAAAAAGAATTCTTTAC 2626730
Query 269380 GGAAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAA 269439
|| || | | | | | | || |||||| | || | |||| ||||| || |
Sbjct 2626731 TGATGCATTGCCAGTTAGTTTGTTGGGAATGAATTGTAAGTTGATGTGTCAATATGTTGA 2626790
Query 269440 GTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAA---TATAACGTTGA 269496
|| || | || ||||| |||| |||| || || |||||| || || ||
Sbjct 2626791 ATTTGTTGCCGACAGATTATTGGTTGCTTTGGG---TAACAAAAAAGTTTACAATGTCAC 2626847
Query 269497 AAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAA 269556
||||| ||| ||||||||||||||| || || | |||||| | |||||||| || ||
Sbjct 2626848 CAATCCATTTGATTTTATGGAGAATATCTCCTTGGCTGGTAAGACCAATTTCTTTGAAAA 2626907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398267229372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |