Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq4 322 6e-83 >seq4 Length=3023470 Score = 322 bits (356), Expect = 6e-83 Identities = 1206/1884 (64%), Gaps = 38/1884 (2%) Strand=Plus/Plus Query 61991 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62049 ||||| |||| || || | ||| || || | || ||| | | |||||||| || || | Sbjct 2500341 CAATGGTGAACTGGATAGCAGCAGAAGCAGCTTGCGTCCTCAAGTAGTACATACCTGTCT 2500400 Query 62050 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 62109 ||| || ||||||| ||||| ||||| || || | ||| | |||||| Sbjct 2500401 TTAATCCTTTCTTCCATCCATAAAAGTGCATGCTTGTCAATTTACCCATGGTTGGATCTT 2500460 Query 62110 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 62169 || || || || | ||||| ||| |||||||| || | || || | |||||| | Sbjct 2500461 TGATGTGAATGTTTAATGATTGTGATTGGTCGATGAATGCAGCTCTATCAGAAGCCATAT 2500520 Query 62170 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 62229 || || |||||| | |||||||||| |||||| || | | ||| || || |||| Sbjct 2500521 CAATAATGTGCTTTTGCGAGATTTCCCAAACAGTTTTGTACAATGCCTTGATTTCGTCTG 2500580 Query 62230 GAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 62286 ||| ||||| | |||||||| ||| | || ||||| ||| |||| || | | Sbjct 2500581 GAATGTTTGGCAAAGCTTGAATGGAACCATTGTTTGAAATAATGCTACTCTTCATAGCGT 2500640 Query 62287 CATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATT 62346 ||||||| | | | || ||| || | | | | |||||||| | |||||| | Sbjct 2500641 CATTCCAAATTCCTAAATCAACCAAATCTTTCAACAAGTATGGATTAACAATTTGAAACT 2500700 Query 62347 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTAT 62406 | |||| ||| ||||| | || ||||||||| || || || || | | ||||| | Sbjct 2500701 CACCAGCCAACACTCTTCTAGAGTAAATATTTGAAGTGTATGGCTCGAAACATTCATTGT 2500760 Query 62407 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62466 | ||||||||||| | || || ||||| ||||| || |||||||| || ||||| | Sbjct 2500761 TACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCCACCAACAAGGAGTTTCTCA 2500820 Query 62467 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62526 ||||| | | | || ||||| | ||||||| ||| | || | || Sbjct 2500821 TACCGTGTTTGGCAAGCTTTTCTTTCAATTCATCCCAATCCCACAATTCAGTTGGCTTTC 2500880 Query 62527 CNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTA 62582 ||| | | ||| | | |||| | | ||| || || Sbjct 2500881 TGTTCCACAAGTCGTATTGCAACAAACCTTGCGATGCTGGTG----AGCCTTGGTAAGTT 2500936 Query 62583 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 62642 || || || ||||| | | | |||| |||| || || | ||| | | ||| || Sbjct 2500937 TCATAGGGACCTTCTTCCGCCGCTAATTCAATTGATGCTTCAACAGCAGCATGATAGATT 2500996 Query 62643 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG-GATAATTTAA 62701 ||||| || || | |||| | || ||||| || ||||||| ||| | || Sbjct 2500997 GTTTCAAAAATTTGAATATTCAATTCCCTAGCTTCTTGGGAATCAAATCCGATTCTCAAA 2501056 Query 62702 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62761 | ||||| || || || || ||||| ||||| | | || ||||| |||||| | || Sbjct 2501057 -ACCATAAATGCATCAGCCAAGCCTTGGACACCCAAGGCAATTGGTCTGTGTCTCATGTT 2501115 Query 62762 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 62821 || | |||||||| |||| || || || || ||| || | | |||| | ||| | Sbjct 2501116 TGATCTCTCAGCTTCAGGAACTGGGTAGTAGTTTCGATCAATGACTCTATTCAAATTACG 2501175 Query 62822 GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT----CAAATC--GC---CCATC 62872 || |||||| || || | || ||| ||| | | || | || ||||| Sbjct 2501176 TGTAACAACTTTGGTGACGTCATGCAACTTGTCAAAGTTGTACCAAGCATGCTTACCATC 2501235 Query 62873 T-----ATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 62927 | || || | || || |||| || |||| |||||||| || || |||| Sbjct 2501236 CTGCTCAATAAAAGAAGGT--AAAGCAATCGAAGCCAAGTTACAAACAGCAACTTCATCT 2501293 Query 62928 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTT 62987 | ||| ||||| | || ||| || | || | | || ||| || |||||| Sbjct 2501294 GGTGCCGAATATTCAACAATTTCACAACACAAGTTGGAAGATTTAATAACACCCAAATTT 2501353 Query 62988 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 63047 | ||| || ||| ||||||| |||||||| || | |||||||| |||||||| ||| Sbjct 2501354 TTTTGGTTGGACTTGGTGTTACAAGCATCCTTGTACAACATGAATGGGGTACCAGTCTCA 2501413 Query 63048 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC 63107 | || | || | || | | ||| | | |||| || ||| | ||| || | | Sbjct 2501414 GTTTGTGCCTCCAAGATGGAATACCACAATTTTTGAGCTTTGATTGTC--TTTCTACCAC 2501471 Query 63108 --CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63165 | |||| | |||||| |||||| | || ||||| || || || ||| Sbjct 2501472 GACCTTCTTTCTCGTATTTCTCATACAACTCAACAAATTCGTCACCATAAGTATCAGCCA 2501531 Query 63166 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63225 | ||| ||||| ||| | | ||| | ||| || || | | || |||| ||||| Sbjct 2501532 AGTTTGGAGCTTCATTTGGAGAGAACAATGTCCAATCACCATTTTGCTCAACTCTTTTCA 2501591 Query 63226 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 63285 |||| | ||| || ||||| | |||| || | ||||| | |||| ||| || || | Sbjct 2501592 TAAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTAGCTCTAATTTCTTCCTTAC 2501651 Query 63286 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63345 | |||||| ||| || | ||| | | ||||||| ||||| ||||| | |||| Sbjct 2501652 CATGGTTCTTTCTAATTTCAATGAAGTCAAAGATATCAGCGTGCCATGGTTCAAGATATA 2501711 Query 63346 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63405 || | | | || || | ||||| || || ||||| | || | ||| ||||| || Sbjct 2501712 AAGCAAAAGCACCTGGTCTCTTGTTACCACCTTGATCCACATAACGAGCAGTGTTGTTGA 2501771 Query 63406 AAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTC 63465 |||| | | ||||||||||||||| ||||| |||| |||||||| | ||| ||| | Sbjct 2501772 AAACACGAACCATTGGAATAATACCATTTGAAGTACCGTTGGTACCAGCGATGTAGGCAC 2501831 Query 63466 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525 || ||| |||||| || || | || || || || || |||| || || || | Sbjct 2501832 CAGTGGAACGAATGTTGTGGATATGCAATCCAATACCACCAGCACTTTTTGAAATCAAGG 2501891 Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585 | ||| ||||| |||||||| ||||| || || ||| || |||| || | | Sbjct 2501892 CACATGTCTTTAAAGTGTCATAAATACCTTCAATAGAATCTTCTTTCATTGCAACCAAGA 2501951 Query 63586 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63645 |||| |||||||| | ||| || ||||| || || |||||| | || | Sbjct 2501952 AACAAGATGACATTTGTGGTTTTGGAGTACCGGCATTGAACAAACATGGAGAACCATGAG 2502011 Query 63646 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 63705 |||| || ||| ||| | | |||||| ||||||||| || ||||| | | || Sbjct 2502012 TAAAGTATCTTTGAGACATCAAATTGTAAGTCTCAATAACTCTTGGGATATCTCTTCCAT 2502071 Query 63706 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 63765 | || || | || || | ||| | || ||| || ||||||||| | | || || | Sbjct 2502072 GGATACCAATAGCAACTCTCATAATCAAGTGTTGTGGTCTTTCAGCAACTTTTCCATTAA 2502131 Query 63766 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTC 63823 | ||||| || ||| | ||||||||||| || ||||| || ||||| ||||| || Sbjct 2502132 TACGTAACAAATATGATCTCTCCAAAGTTTTGAATCCAAAGTAATTGTAGTTGAAA--TC 2502189 Query 63824 TCGTTCGTAAATAATAACCGAGTT 63847 || || |||| ||| | ||||| Sbjct 2502190 ACGGTCATAAACAATTGCTGAGTT 2502213 Score = 320 bits (354), Expect = 2e-82 Identities = 605/880 (69%), Gaps = 14/880 (2%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| ||| || | |||||| || ||||| || || || |||| || ||||| Sbjct 2626928 TTTTGGTAATCAGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAGGAGATATTC 2626869 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||| |||||||| |||||||| ||||| |||| |||||| ||||| || | Sbjct 2626868 TCCATAAAATCAAATGGATTGGTGACATTGTAAACTTTTTTGTTACCCAAAGCAACCAAT 2626809 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 ||||| || || || ||||| | |||| ||||| | |||||||||||| | | Sbjct 2626808 AATCTGTCGGCAACAAATTCAACATATTGACACATCAACTTACAATTCATTCCCAACAAA 2626749 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 ||||||| | || |||||| ||||||| |||||| || || || || ||||| Sbjct 2626748 CTAACTGGCAATGCATCAGTAAAGAATTCTTTTTCAATTTCAACTGCTTCAGTAATAATT 2626689 Query 33253 GATCTAACGGTTTCTTCACTC-GGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 | ||| | | || || ||| ||| |||||| ||||| ||| ||||| || Sbjct 2626688 CTTTCAACAATCT-TTGGGTCAGGTCTATGTTGTAAATGAGCAAACAACAAGCATGCAAA 2626630 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 ||| ||| | ||| || || | || ||| | ||| |||||||| || | ||| ||||| Sbjct 2626629 ATCAGTGTGTAAACCTTCATCACGACAAATCAATTCATTGGAAAAGGTCAATCCTGGCAT 2626570 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 || || | ||| || | ||| || |||||||| || |||||| || ||||| || || Sbjct 2626569 TAATCCTCTCTTCTTCAACCAGAAAATGGAAGCAAACGATCCACTGAAAAAGATACCCTC 2626510 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC----CGGCGCTGTCATGTATCCA-C 33486 || |||||||| |||| | |||||| || ||| | || || || ||||| | Sbjct 2626509 AACAGCAGCAAAAGCAACCAATCTCTCAGCA-AACAATGCATCGGAATCTTGAATCCATC 2626451 Query 33487 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33546 | || |||||||| ||||||||||| | ||| || ||||| || ||||| || | Sbjct 2626450 TGATG-GCCCAATCAGCCTTCTTTTTAATTTGAGGGATGGTTTCAATAGCATTGAATAAG 2626392 Query 33547 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33606 | | ||| || ||| || | |||||| || ||||| | ||| |||| ||| Sbjct 2626391 AAATCGGCTTCCTTTGGATCCTTGATATAAGTTTCAATCAATAATGAATAAGTTTCTGAA 2626332 Query 33607 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACT 33666 ||||||||||| || || || || || || || || | || || | ||| || ||| Sbjct 2626331 TGAATGTTTTCCATCATGATTTGGAAACCATAAAATGATTTGGCTTCAGGAATTTGAACT 2626272 Query 33667 TCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33726 || | | |||| |||| |||| |||||||| || || || ||| ||| || ||||| Sbjct 2626271 TCAGCAGAAAAGTTTTCCACCAAGTTTTCATTAACAATACCATCAGAGGCAGCGAAAAAG 2626212 Query 33727 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGTTTAT---TCCAATCATT 33782 ||||| | | || ||| | |||| | || || | ||| | ||||||||| Sbjct 2626211 GCCAAGATTCTTCCAATGAAAAACCTTTCAT-TGTCATTCAATTTCTCTCTCCAATCATG 2626153 Query 33783 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33842 | ||||||| || ||| | |||||| | ||||| |||||||| || ||||| || || Sbjct 2626152 AAGATCTTTACCTAAATCAATTTCTTCTGCAGTCCAGAATGATGCTTCAGCCTTCTTGTA 2626093 Query 33843 CATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACA 33882 ||| | ||| || |||| ||| || || || || ||| Sbjct 2626092 CATTTGCCAAATTTCATGGTATCTAATAGGAAACATGACA 2626053 Score = 89.7 bits (98), Expect = 6e-13 Identities = 412/640 (64%), Gaps = 18/640 (3%) Strand=Plus/Minus Query 63178 CATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAG 63237 |||| ||| | | ||| ||||| || ||| | ||| |||| || |||||| | ||||| Sbjct 920593 CATCGGGAGAAAACAAAGACCAATCACCGCCGGACTTTACTCTTTGCATAAACAAATCAG 920534 Query 63238 GAATCCAAAGAGCTAT-AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTT 63296 ||||||| | | | || ||| | ||| || || | | || ||||| || ||||||| Sbjct 920533 GAATCCACA-ACCCATAAAACAAATCCCTCGTACGAAACTCTTCGTTCCCATGATTCTTT 920475 Query 63297 TTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACT 63356 | | | | | | | | | ||| | |||||| || |||||||| || || | | || Sbjct 920474 CTCATGTTTAAAATCTCAAACACATCGGCATGCCAAGGCTCCAAGTAGATAGCGAAAGCT 920415 Query 63357 CCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 63416 || || | |||| ||| || || || | |||| || ||||| || | |||| ||| Sbjct 920414 CCTGGTCTTTTGCCTCCACCTTGGTCAACATATCGGGCAGTGTTGTTGAATACTCGTAAC 920355 Query 63417 ATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGA 63476 || |||| | || || | | |||||||| | || |||| || ||| | | Sbjct 920354 ATGGGAACTACTCCACCTGCTCTTCCATTGGTGCTGGCTATATGCGAGCCTTGGGCCCTA 920295 Query 63477 ATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG-CGCATCGTT 63534 ||||| ||| ||| | || || || || | |||||| ||||| | ||| || | Sbjct 920294 ATATTGTGAATATGA-ATTCCAATACCGCCAGAAGCTTTAGAAATTAACGCCGCTTC-AT 920237 Query 63535 TTAACGTGTCATAGATACCCTCTATGCTATCATCGATCA-TGTTAAGTAGAAAACAGCTA 63593 | ||| | |||||| || || || |||||| ||| || ||| | ||| ||| Sbjct 920236 GAAGCGTTTGATAGATCCCATCAATTGAATCATCCTTCATTGCTAA-CAAAAAGCAGGAT 920178 Query 63594 GACATTTGGT--GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 63651 || | | || ||| | ||| |||||| ||| || || || || | || Sbjct 920177 GAAAGGTAGTTGTACGCGCA--TCCGGCATTATATAGTGTTGGCAGTGCATGGATGAAGT 920120 Query 63652 ATTTTTCAGAAAGTAGATTGTACGT---CTCAATAGCTGAGTCTATATCCCATTGATGAA 63708 |||||| || | ||| ||| || ||||| ||| | ||| || ||| |||| Sbjct 920119 ATTTTTGGGACATTAGTACGTATGTTTCCTCAACCGCT---TGTATGTCATCTTGGTGAA 920063 Query 63709 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 63768 || ||| || || | | ||||||| | || ||||| | || |||||| || Sbjct 920062 TTTCTATAGCCACTCTGAGAAACATGTATTCTGGAGTTTCAGCTATTTTGTTGCCAGTTC 920003 Query 63769 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 63808 || | | || || ||||||||||| || | |||||||| Sbjct 920002 TCCAAAGATATGAGTTTTCCAAAGTCTTGATTCCAAAATA 919963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947129918440