Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20parapsilosis_20[genbank_20GCA_5F000182765.2_202011-10-26] 9 sequences; 13,030,174 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5 129 5e-25 seq3 109 5e-19 >seq5 Length=2091826 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 || ||||||| | || || |||||||| || || || | || ||| | || || ||| | Sbjct 2076134 CACAATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAGTC 2076075 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||| || || | |||||| ||||| ||||||||||| || || || || Sbjct 2076074 ATCAGACACTATTGACAACGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGA 2076015 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||| ||| |||||| | || || ||| | ||||||| |||| | ||| || Sbjct 2076014 TCAACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTA 2075955 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||||||||| ||| | || || ||||| ||||||||||| || Sbjct 2075954 CAACATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 2075904 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || |||||||| ||||| || | || ||| | || || || | Sbjct 2075674 ATGCAAATTTTCGTCAAAACATTGACTGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075615 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| ||||| ||||||||||| || || || |||||| Sbjct 2075614 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075555 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||||| | || || ||| | ||||||| |||| | ||| || ||| Sbjct 2075554 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075495 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||||||||| ||| | || || ||||| ||||||||||| || Sbjct 2075494 ATTCAAAAAGAATCCACATTACACTTGGTGTTGAGATTGAGAGGTGG 2075448 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || |||||||| || || || | || ||| | || || || | Sbjct 2075902 ATGCAAATTTTCGTCAAAACATTGACCGGTAAGACCATCACCTTAGAGGTTGAATCATCA 2075843 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| ||||| ||||||||||| || || || |||||| Sbjct 2075842 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCAGATCAA 2075783 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||||| | || || ||| | ||||||| |||| | ||| || ||| Sbjct 2075782 CAAAGATTGATTTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 2075723 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||||||||| ||| | || || ||||| ||||||||||| || Sbjct 2075722 ATTCAAAAAGAATCCACATTGCACTTGGTGTTGAGATTGAGAGGTGG 2075676 >seq3 Length=962442 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| ||||| | || || ||| | || || | ||||| ||| | Sbjct 22340 AATGCAAATCTTTGTCAAAACCCTTACGGGTAAAACCATCACTTTAGAAGTTGAGTCATC 22399 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| || | ||||| ||||| ||||| ||||| || || || ||||| Sbjct 22400 TGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCAGATCA 22459 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| ||| |||| | | || || ||| | ||||||| |||| | ||| || || Sbjct 22460 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 22519 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| ||||| |||||||| | || || ||||| ||||||||||| || Sbjct 22520 CATCCAAAAGGAATCTACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 22567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935952841395